RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 OR5B3Q8NH48 314 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 OR4A5Q8NH83 315 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 SETD6Q8TBK2 473 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 CD300LFQ8TDQ1 290 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 UFD1Q92890 307 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 SMIM19Q96E16 107 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 MGLLQ99685 303 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 RIMS4Q9H426 269 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-222ENST00000551425 CHMP1AQ9HD42 196 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-222ENST00000551425 UFC1Q9Y3C8 167 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 OR4C46A6NHA9 309 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 CREBL2O60519 120 aaPredicted RBP8.69□□□□□ -1.02
PTCH1-222ENST00000551425 RRASP10301 218 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 HLA-DRB3P79483 266 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 TPBGQ13641 420 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 KLK9Q2XQG4 91 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 YIF1BQ5BJH7 314 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 IDO2Q6ZQW0 420 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 Q6ZR54 194 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 MS4A15Q8N5U1 240 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 ZFP41Q8N8Y5 198 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 OR13C5Q8NGS8 318 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 EEF1AKMT3Q96AZ1 226 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 FANCD2OSQ96PS1 177 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 ZNF430Q9H8G1 570 aaPredicted RBP8.69□□□□□ -1.02
PTCH1-222ENST00000551425 GHRLQ9UBU3 117 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 KLK9Q9UKQ9 250 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 MGAT4AQ9UM21 535 aa8.69□□□□□ -1.02
PTCH1-222ENST00000551425 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
PTCH1-222ENST00000551425 PNMA8CA0A1B0GUJ8 204 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 NPIPB5A8MRT5 1133 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 ACTL6BO94805 426 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 AMBPP02760 352 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 PSMB9P28065 219 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 TRAM1Q15629 374 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 NEDD8Q15843 81 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 Q499Y3 187 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 C10orf55Q5SWW7 151 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 LIPKQ5VXJ0 399 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 LAMTOR1Q6IAA8 161 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 CEACAM19Q7Z692 300 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 Q8NAQ8 132 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 PGLYRP3Q96LB9 341 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 UQCC2Q9BRT2 126 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 MRPS26Q9BYN8 205 aaKnown RBP8.68□□□□□ -1.02
PTCH1-222ENST00000551425 RDH8Q9NYR8 311 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 S4R3C0 116 aa8.68□□□□□ -1.02
PTCH1-222ENST00000551425 TRBV5-7A0A0A0MS05 114 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 TRBV7-1A0A0A6YYK4 115 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 IGKV1-6A0A0C4DH72 117 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 C16orf90A8MZG2 172 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 TEX22C9J3V5 150 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 CLEC3BP05452 202 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 GSTT2P0CG29 244 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 GSTT2BP0CG30 244 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 PSMA1P25786 263 aaKnown RBP8.67□□□□□ -1.02
PTCH1-222ENST00000551425 HLA-DMBP28068 263 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 RPS11P62280 158 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTCH1-222ENST00000551425 CDK10Q15131 360 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 SOHLH1Q5JUK2 328 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 C19orf35Q6ZS72 473 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 Q6ZTC4 211 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 APRG1Q8IVJ8 170 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 MMD2Q8IY49 270 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 OSR1Q8TAX0 266 aaPredicted RBP8.67□□□□□ -1.02
PTCH1-222ENST00000551425 SDHAF2Q9NX18 166 aa8.67□□□□□ -1.02
PTCH1-222ENST00000551425 HMX3A6NHT5 357 aa8.66□□□□□ -1.02
PTCH1-222ENST00000551425 CRYZL1O95825 349 aa8.66□□□□□ -1.02
PTCH1-222ENST00000551425 CRYGCP07315 174 aa8.66□□□□□ -1.02
PTCH1-222ENST00000551425 SMIM18P0DKX4 95 aa8.66□□□□□ -1.02
PTCH1-222ENST00000551425 HTR2CP28335 458 aa8.66□□□□□ -1.02
PTCH1-222ENST00000551425 CMC4P56277 68 aaPredicted RBP8.66□□□□□ -1.02
PTCH1-222ENST00000551425 RPS27AP62979 156 aaKnown RBP8.66□□□□□ -1.02
PTCH1-222ENST00000551425 TMEM187Q14656 261 aa8.66□□□□□ -1.02
PTCH1-222ENST00000551425 NKAIN3Q8N8D7 197 aa8.66□□□□□ -1.02
PTCH1-222ENST00000551425 C5orf30Q96GV9 206 aa8.66□□□□□ -1.02
PTCH1-222ENST00000551425 FYTTD1Q96QD9 318 aaKnown RBP8.66□□□□□ -1.02
PTCH1-222ENST00000551425 ZNF436Q9C0F3 470 aaPredicted RBP8.66□□□□□ -1.02
PTCH1-222ENST00000551425 OR2D2Q9H210 308 aa8.66□□□□□ -1.02
PTCH1-222ENST00000551425 Q9N2K0 584 aa8.66□□□□□ -1.02
PTCH1-222ENST00000551425 SCRT2Q9NQ03 307 aa8.66□□□□□ -1.02
PTCH1-222ENST00000551425 DHFRP00374 187 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 UBBP0CG47 229 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 RBMY1A1P0DJD3 496 aaKnown RBP8.65□□□□□ -1.02
PTCH1-222ENST00000551425 RBMY1CP0DJD4 496 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 SAA1P0DJI8 122 aaPredicted RBP8.65□□□□□ -1.02
PTCH1-222ENST00000551425 HIST1H1BP16401 226 aaKnown RBP8.65□□□□□ -1.02
PTCH1-222ENST00000551425 MAPK3P27361 379 aaPredicted RBP8.65□□□□□ -1.02
PTCH1-222ENST00000551425 SERPINB10P48595 397 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 RBMY1FQ15415 496 aaKnown RBP8.65□□□□□ -1.02
PTCH1-222ENST00000551425 ZNF124Q15973 351 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 ACSM3Q53FZ2 586 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 TMEM190Q8WZ59 177 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 ADTRPQ96IZ2 230 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 CXorf58Q96LI9 332 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 HDHD3Q9BSH5 251 aaPredicted RBP8.65□□□□□ -1.02
PTCH1-222ENST00000551425 TM2D1Q9BX74 207 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 DAZ1Q9NQZ3 744 aaKnown RBP8.65□□□□□ -1.02
PTCH1-222ENST00000551425 SLC2A9Q9NRM0 540 aa8.65□□□□□ -1.02
PTCH1-222ENST00000551425 PLEKHJ1Q9NW61 149 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms