RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 FCGR3AP08637 254 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 IL6RP08887 468 aaPredicted RBP5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 UBBP0CG47 229 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 IGKV1-13P0DP09 117 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 RPL35AP18077 110 aaKnown RBP5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 NFYAP23511 347 aaPredicted RBP5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 CALRP27797 417 aaKnown RBP5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 BRWD1-AS2P59051 145 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 MED21Q13503 144 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 SPHARQ15513 63 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 C15orf32Q32M92 178 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 TTC23Q5W5X9 447 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 FAM71F2Q6NXP2 309 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 UNQ9165/PRO28630Q6UXU0 137 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 MOB1BQ7L9L4 216 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 TMEM61Q8N0U2 210 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 Q8N402 240 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 FAM89BQ8N5H3 189 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 LINC00476Q8WZB0 136 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 DDB2Q92466 427 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 SNAPC3Q92966 411 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 PTX4Q96A99 478 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 LRRC42Q9Y546 428 aa5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 RBM7Q9Y580 266 aaKnown RBP5.11□□□□□ -1.59
PRPF40B-214ENST00000551320 MFSD2BA6NFX1 497 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 TEX22C9J3V5 150 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 SLC17A2O00624 439 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 ITGB1BP1O14713 200 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 OR2A4O95047 310 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 SPDEFO95238 335 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 MAPK3P27361 379 aaPredicted RBP5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 DUTP33316 252 aaKnown RBP5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 IRF3Q14653 427 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 DEFB135Q30KP9 77 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 BTNL8Q6UX41 500 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 NR2C2APQ86WQ0 139 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 UXS1Q8NBZ7 420 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 OR10J5Q8NHC4 309 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 IL17DQ8TAD2 202 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 NRG4Q8WWG1 115 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 PHYHIPQ92561 330 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 RAB3CQ96E17 227 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 RNF5Q99942 180 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 GINS4Q9BRT9 223 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 URM1Q9BTM9 101 aaKnown RBP5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 ST6GALNAC5Q9BVH7 336 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 KRTAP4-8Q9BYQ9 185 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 DNAH6Q9C0G6 4158 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 CCDC90BQ9GZT6 254 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 GHRLQ9UBU3 117 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 SPATA2Q9UM82 520 aa5.1□□□□□ -1.59
PRPF40B-214ENST00000551320 TRBV6-7A0A0A0MS04 114 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 IGHV3-49A0A0A0MS15 119 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 TRBV9A0A0B4J1U6 114 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 TMEM213A2RRL7 107 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 CGB1A6NKQ9 187 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 DEFB4AO15263 64 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 IGLV2-14P01704 120 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 CD1AP06126 327 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 CD37P11049 281 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 CBLN1P23435 193 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 CRHBPP24387 322 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 KIR2DS2P43631 304 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 ARFRP1Q13795 201 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 TATDN3Q17R31 274 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 RTL8BQ17RB0 113 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 ZNF585BQ52M93 769 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 H1FOOQ8IZA3 346 aaPredicted RBP5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 MS4A15Q8N5U1 240 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 OR4A4PQ8NGN8 299 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 OR10R2Q8NGX6 335 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 NUDCD2Q8WVJ2 157 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 UFD1Q92890 307 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 USMG5Q96IX5 58 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 CABLES2Q9BTV7 478 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 MND1Q9BWT6 205 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 PLCXD1Q9NUJ7 323 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 SLC2A8Q9NY64 477 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 TAS2R8Q9NYW2 309 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 SIGLEC8Q9NYZ4 499 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 HSF4Q9ULV5 492 aa5.09□□□□□ -1.59
PRPF40B-214ENST00000551320 IGHV3OR16-13A0A075B7E8 117 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 IGHV3-74A0A0B4J1X5 117 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 H3BUA1 57 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 MFNGO00587 321 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 CLEC3BP05452 202 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 HIST1H1DP16402 221 aaKnown RBP5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 AADACP22760 399 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 FCGR2BP31994 310 aaPredicted RBP5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 ARL3P36405 182 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 AQP4P55087 323 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 UBE2KP61086 200 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 SSX1Q16384 188 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 VMA21Q3ZAQ7 101 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 CDNFQ49AH0 187 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 GAGE13Q4V321 117 aa5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 OGFRL1Q5TC84 451 aaPredicted RBP5.08□□□□□ -1.6
PRPF40B-214ENST00000551320 LYG2Q86SG7 212 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms