RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	TRPT1	Q86TN4	253 aa	Known RBP	4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	STH	Q8IWL8	128 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	STX19	Q8N4C7	294 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TTC9C	Q8N5M4	171 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	PXT1	Q8NFP0	134 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	OR52N1	Q8NH53	320 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	GIPC3	Q8TF64	312 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	CANT1	Q8WVQ1	401 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	ACOT12	Q8WYK0	555 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TMEM190	Q8WZ59	177 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	NIPSNAP3B	Q9BS92	247 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	THTPA	Q9BU02	230 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TEX12	Q9BXU0	123 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	ZNF436	Q9C0F3	470 aa	Predicted RBP	4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260		Q9H3A6	140 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	REEP1	Q9H902	201 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	SLC2A9	Q9NRM0	540 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	SLC35D1	Q9NTN3	355 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	ZNF586	Q9NXT0	402 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	PIPOX	Q9P0Z9	390 aa		4.07	□□□□□ -1.76
RACGAP1-223	ENST00000551260	UBC	P0CG48	685 aa	Known RBP	4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	SERPINA2	P20848	420 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	ACTR3	P61158	418 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	EFNB1	P98172	346 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	CDK5	Q00535	292 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	PRSS8	Q16651	343 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	LY6G6F	Q5SQ64	297 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	LIPK	Q5VXJ0	399 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	PDPN	Q86YL7	162 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	CCDC54	Q8NEL0	328 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	OR13C3	Q8NGS6	347 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	NTN5	Q8WTR8	489 aa	Predicted RBP	4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TRUB1	Q8WWH5	349 aa	Known RBP	4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	IL1F10	Q8WWZ1	152 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	EEF1AKMT3	Q96AZ1	226 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	HARBI1	Q96MB7	349 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	C20orf24	Q9BUV8	137 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	RAB9B	Q9NP90	201 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	POMP	Q9Y244	141 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TNFRSF18	Q9Y5U5	241 aa		4.06	□□□□□ -1.76
RACGAP1-223	ENST00000551260	IGHV3OR16-13	A0A075B7E8	117 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	IGHV3-74	A0A0B4J1X5	117 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	METTL15	A6NJ78	407 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	MCRIP1	C9JLW8	97 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260		M0R129	80 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	GNGT2	O14610	69 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	KRT8	P05787	483 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	FCGR1A	P12314	374 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	MAL	P21145	153 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	PSMB6	P28072	239 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	CCL18	P55774	89 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	CMC4	P56277	68 aa	Predicted RBP	4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	ERVFC1-1	P60608	527 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TMED1	Q13445	227 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	PTGES3	Q15185	160 aa	Known RBP	4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	USF2	Q15853	346 aa	Predicted RBP	4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	NHLRC3	Q5JS37	347 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TMEM69	Q5SWH9	247 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TRAT1	Q6PIZ9	186 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	PLET1	Q6UQ28	207 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	SSX7	Q7RTT5	188 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	ADGRG5	Q8IZF4	528 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	GAPT	Q8N292	157 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	OR51A2	Q8NGJ7	313 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	MRPL30	Q8TCC3	161 aa	Known RBP	4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	RNF125	Q96EQ8	232 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	PELI1	Q96FA3	418 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	UHRF2	Q96PU4	802 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	GPER1	Q99527	375 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	FEV	Q99581	238 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	AIFM2	Q9BRQ8	373 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	AGMAT	Q9BSE5	352 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TMEM70	Q9BUB7	260 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	ZNF556	Q9HAH1	456 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	DAZ1	Q9NQZ3	744 aa	Known RBP	4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	CLN6	Q9NWW5	311 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	AASS	Q9UDR5	926 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	SMPX	Q9UHP9	88 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260	AP4S1	Q9Y587	144 aa		4.05	□□□□□ -1.76
RACGAP1-223	ENST00000551260		A0A087WTM6	91 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260		A0A1W2PQL4	384 aa	Predicted RBP	4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TEX22	C9J3V5	150 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260		E7EUB6	86 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260		M0R1X1	148 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	CHEK1	O14757	476 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	BAG2	O95816	211 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	APOA2	P02652	100 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	REG1A	P05451	166 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	RPSA	P08865	295 aa	Known RBP	4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	SPP1	P10451	314 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	AREG	P15514	252 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	FLOT2	Q14254	428 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	MPV17L	Q2QL34	196 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TP53I3	Q53FA7	332 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TMEM41B	Q5BJD5	291 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TTC32	Q5I0X7	151 aa		4.04	□□□□□ -1.76
RACGAP1-223	ENST00000551260	TMEM244	Q5VVB8	128 aa		4.04	□□□□□ -1.76

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