RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 IGHV1-46P01743 117 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 SPCS3P61009 180 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 Q5PR19 223 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 C8orf46Q8TAG6 207 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 TECRQ9NZ01 308 aaKnown RBP10.29□□□□□ -0.76
NR4A1-215ENST00000550557 A0A087WV48 116 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 EFNA2O43921 213 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 PLAURQ03405 335 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 BSXQ3C1V8 233 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 ANKRD55Q3KP44 614 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 FAM78BQ5VT40 261 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 C16orf82Q7Z2V1 217 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 STPG3Q8N7X2 389 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 STXBP6Q8NFX7 210 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 NAT8BQ9UHF3 227 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 HSF4Q9ULV5 492 aa10.29□□□□□ -0.76
NR4A1-215ENST00000550557 A0A0G2JLM5 398 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 HIST1H1EP10412 219 aaKnown RBP10.28□□□□□ -0.76
NR4A1-215ENST00000550557 C5orf66Q9H5L9 145 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 TMEM167BQ9NRX6 74 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 KIF26BQ2KJY2 2108 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 CEACAM18A8MTB9 384 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 IGFBP3P17936 291 aaPredicted RBP10.28□□□□□ -0.76
NR4A1-215ENST00000550557 PLAC9Q5JTB6 97 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 COLCA1Q6ZS62 124 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 LYZL2Q7Z4W2 148 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 Q96M66 194 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 LINC00312Q9Y6C7 94 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 ZNF407Q9C0G0 2248 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 DEDDO75618 318 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 TM4SF20Q53R12 229 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 NCMAPQ5T1S8 102 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 C10orf113Q5VZT2 155 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 ZNF474Q6S9Z5 364 aaPredicted RBP10.28□□□□□ -0.76
NR4A1-215ENST00000550557 OR10G4Q8NGN3 311 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 OR10G9Q8NGN4 311 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 OR10G7Q8NGN6 311 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 EEF1AKMT3Q96AZ1 226 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 OR10C1Q96KK4 312 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 BMPR1BO00238 502 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 HKR1P10072 659 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 FCER1GP30273 86 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 VDAC2P45880 294 aaPredicted RBP10.28□□□□□ -0.76
NR4A1-215ENST00000550557 GNG4P50150 75 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 P2RY4P51582 365 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 FHL1Q13642 323 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 LBHQ53QV2 105 aaPredicted RBP10.28□□□□□ -0.76
NR4A1-215ENST00000550557 ATRAIDQ6UW56 229 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 MYPOPQ86VE0 399 aaPredicted RBP10.28□□□□□ -0.76
NR4A1-215ENST00000550557 WBP1Q96G27 269 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 RCC2Q9P258 522 aaKnown RBP10.28□□□□□ -0.76
NR4A1-215ENST00000550557 CLDN16Q9Y5I7 305 aa10.28□□□□□ -0.76
NR4A1-215ENST00000550557 IGHV3OR16-12A0A075B7B8 117 aa10.27□□□□□ -0.76
NR4A1-215ENST00000550557 KIAA1324LA8MWY0 1029 aaPredicted RBP10.27□□□□□ -0.76
NR4A1-215ENST00000550557 M0QZK8 103 aa10.27□□□□□ -0.76
NR4A1-215ENST00000550557 WISP1O95388 367 aa10.27□□□□□ -0.76
NR4A1-215ENST00000550557 SLX1AQ9BQ83 275 aa10.27□□□□□ -0.76
NR4A1-215ENST00000550557 ZMAT5Q9UDW3 170 aaKnown RBP10.27□□□□□ -0.76
NR4A1-215ENST00000550557 MED13LQ71F56 2210 aa10.27□□□□□ -0.76
NR4A1-215ENST00000550557 A6NNC1 897 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 RNF223E7ERA6 249 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 SLC31A2O15432 143 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 TDGF1P13385 188 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 CCL3L1P16619 93 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 PTTG1IPP53801 180 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 EWSR1Q01844 656 aaKnown RBP eCLIP10.27□□□□□ -0.77
NR4A1-215ENST00000550557 RNF151Q2KHN1 245 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 DPPA3Q6W0C5 159 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 C3orf56Q8N813 242 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 ATRXP46100 2492 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 KBTBD11-OT1A0A1B0GTJ5 212 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 TEPPQ6URK8 271 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 LRP11Q86VZ4 500 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 C16orf92Q96LL3 132 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 QTRT1Q9BXR0 403 aaKnown RBP10.27□□□□□ -0.77
NR4A1-215ENST00000550557 VAX2Q9UIW0 290 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 HIGD1AQ9Y241 93 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 TEX50A0A1B0GTY4 177 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 LOC102723971A0A1B0GUV8 181 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 GATCO43716 136 aaKnown RBP10.27□□□□□ -0.77
NR4A1-215ENST00000550557 HYPMO75409 117 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 CRYGSP22914 178 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 DYNLT3P51808 116 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 C11orf44Q8N8P7 122 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 ABCA1O95477 2261 aa10.27□□□□□ -0.77
NR4A1-215ENST00000550557 RNF222A6NCQ9 220 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 RRN3P1Q2M238 152 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 DDB2Q92466 427 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 TMEM140Q9NV12 185 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 FANCMQ8IYD8 2048 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 TMEM50BP56557 158 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 DUX5Q96PT3 197 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 A0A1B0GTI1 187 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 FCN1O00602 326 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 FREM3P0C091 2139 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 ZNF137PP52743 207 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 UNC119Q13432 240 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 OR4B1Q8NGF8 309 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 KLHDC3Q9BQ90 382 aa10.26□□□□□ -0.77
NR4A1-215ENST00000550557 FBXL15Q9H469 300 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms