RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 GPHB5Q86YW7 130 aa11.53□□□□□ -0.56
RAB5C-205ENST00000550013 OR52B4Q8NGK2 314 aa11.53□□□□□ -0.56
RAB5C-205ENST00000550013 FANCD2OSQ96PS1 177 aa11.53□□□□□ -0.56
RAB5C-205ENST00000550013 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
RAB5C-205ENST00000550013 RBMX2Q9Y388 322 aaKnown RBP11.53□□□□□ -0.56
RAB5C-205ENST00000550013 PRELID3BQ9Y3B1 194 aa11.53□□□□□ -0.56
RAB5C-205ENST00000550013 DPPA5A6NC42 116 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 PDCD5O14737 125 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 HLA-DQB1P01920 261 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 ZNF735P0CB33 412 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 MYOD1P15172 320 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 AQP4P55087 323 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 PMS2P11Q13670 270 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 SSX1Q16384 188 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 PUSL1Q8N0Z8 303 aaKnown RBP11.52□□□□□ -0.57
RAB5C-205ENST00000550013 UXS1Q8NBZ7 420 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 TMEM167AQ8TBQ9 72 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 OR2A7Q96R45 310 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 ST6GALNAC5Q9BVH7 336 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 SLC2A9Q9NRM0 540 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 MRPS7Q9Y2R9 242 aaKnown RBP11.52□□□□□ -0.57
RAB5C-205ENST00000550013 OR2W1Q9Y3N9 320 aa11.52□□□□□ -0.57
RAB5C-205ENST00000550013 TRAV1-2A0A0B4J238 106 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 METTL21EPA6NDL7 271 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 A8MWP6 167 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 LY6G6CO95867 125 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 REG1AP05451 166 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 CD36P16671 472 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 DTYMKP23919 212 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 BRWD1-AS2P59051 145 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 EWSR1Q01844 656 aaKnown RBP eCLIP11.51□□□□□ -0.57
RAB5C-205ENST00000550013 EIF4EBP1Q13541 118 aaPredicted RBP11.51□□□□□ -0.57
RAB5C-205ENST00000550013 CDNFQ49AH0 187 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 FAM106AQ4KMX7 169 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 BTNL8Q6UX41 500 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 OR4S2Q8NH73 311 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 TCTEX1D2Q8WW35 142 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 GPHA2Q96T91 129 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 CENPOQ9BU64 300 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 ATG5Q9H1Y0 275 aa11.51□□□□□ -0.57
RAB5C-205ENST00000550013 LOC102724200A0A096LPH7 203 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-205ENST00000550013 SMIM30A4D0T7 59 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 MFSD2BA6NFX1 497 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 CRYGCP07315 174 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 PSMB6P28072 239 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 TM4SF20Q53R12 229 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 SSX9Q7RTT3 188 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 PRSS48Q7RTY5 328 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 NR2C2APQ86WQ0 139 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 VSTM2AQ8TAG5 236 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 NUDCD2Q8WVJ2 157 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 EEF1AKMT3Q96AZ1 226 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 SPATA2Q9UM82 520 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 DNAH10Q8IVF4 4471 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 KMT2AQ03164 3969 aa11.5□□□□□ -0.57
RAB5C-205ENST00000550013 A0A0J9YWU9 116 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 CTXN2P0C2S0 81 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 CTRB1P17538 263 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 RAB3BP20337 219 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 CRHBPP24387 322 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 MYL9P24844 172 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 MAS1LP35410 378 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 KLK9Q2XQG4 91 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 CTRB2Q6GPI1 263 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 UNQ9165/PRO28630Q6UXU0 137 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 NRG4Q8WWG1 115 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 HSD17B10Q99714 261 aaKnown RBP11.49□□□□□ -0.57
RAB5C-205ENST00000550013 KRTAP17-1Q9BYP8 105 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 TAS2R8Q9NYW2 309 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 KLK9Q9UKQ9 250 aa11.49□□□□□ -0.57
RAB5C-205ENST00000550013 IGLV11-55A0A075B6I3 123 aa11.48□□□□□ -0.57
RAB5C-205ENST00000550013 TMEM235A6NFC5 223 aa11.48□□□□□ -0.57
RAB5C-205ENST00000550013 ERICH4A6NGS2 130 aa11.48□□□□□ -0.57
RAB5C-205ENST00000550013 CGB1A6NKQ9 187 aa11.48□□□□□ -0.57
RAB5C-205ENST00000550013 SLC22A5O76082 557 aa11.48□□□□□ -0.57
RAB5C-205ENST00000550013 ANKRD55Q3KP44 614 aa11.48□□□□□ -0.57
RAB5C-205ENST00000550013 HACD4Q5VWC8 232 aa11.48□□□□□ -0.57
RAB5C-205ENST00000550013 OR4A47Q6IF82 309 aa11.48□□□□□ -0.57
RAB5C-205ENST00000550013 MFSD4AQ8N468 514 aa11.48□□□□□ -0.57
RAB5C-205ENST00000550013 IGHV3-35A0A0C4DH35 117 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 ANKRD65E5RJM6 399 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 DHFRP00374 187 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 CLEC3BP05452 202 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 DEFA4P12838 97 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 HIST1H1BP16401 226 aaKnown RBP11.47□□□□□ -0.57
RAB5C-205ENST00000550013 HLA-GP17693 338 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 RPL8P62917 257 aaKnown RBP11.47□□□□□ -0.57
RAB5C-205ENST00000550013 ARL6IP1Q15041 203 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 ZNF585BQ52M93 769 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 CNIH2Q6PI25 160 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 ZNF367Q7RTV3 350 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 DCSTAMPQ9H295 470 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 NDUFB11Q9NX14 153 aa11.47□□□□□ -0.57
RAB5C-205ENST00000550013 TRBV7-1A0A0A6YYK4 115 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 TRDV1A0A1B0GX56 115 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 NUPR2A6NF83 97 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 TNFSF12O43508 249 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 SSX5O60225 188 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 HRASP01112 189 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms