RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 RTL8BQ17RB0 113 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 PRAMEF5Q5TYX0 476 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 WDR25Q64LD2 544 aaPredicted RBP5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 TMEM200BQ69YZ2 307 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 DHRS7BQ6IAN0 325 aaPredicted RBP5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 LYPD2Q6UXB3 125 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 TMUB2Q71RG4 321 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 C5orf24Q7Z6I8 188 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 SLC51BQ86UW2 128 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 SPAG16Q8N0X2 631 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 LYG1Q8N1E2 194 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 OR10X1Q8NGY0 326 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 OR4S2Q8NH73 311 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 OR9G1Q8NH87 305 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 OR10C1Q96KK4 312 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 CLCC1Q96S66 551 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 SSBP3Q9BWW4 388 aaPredicted RBP5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 SLC25A31Q9H0C2 315 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 MMP26Q9NRE1 261 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 C19orf12Q9NSK7 152 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 PRR13Q9NZ81 148 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 MBD2Q9UBB5 411 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 LSM5Q9Y4Y9 91 aaKnown RBP5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 POMT1Q9Y6A1 747 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 SESN1Q9Y6P5 492 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 NOTCH3Q9UM47 2321 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 WNK2Q9Y3S1 2297 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 TRAV14DV4A0A0A6YYC5 116 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 CLPSL1A2RUU4 121 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 FAM90A9PA6NNJ1 464 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 FAM90A26D6RGX4 464 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 K7EPK0 472 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 M0R1W7 72 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 DEDDO75618 318 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 HRASP01112 189 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 LYL1P12980 280 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 DUTP33316 252 aaKnown RBP5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 P2RY1P47900 373 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 GNG10P50151 68 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 RAB13P51153 203 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 RPL23AP62750 156 aaKnown RBP5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 RAB32Q13637 225 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF273Q14593 569 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 LGALSLQ3ZCW2 172 aaPredicted RBP5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 GPR157Q5UAW9 335 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 EIF5AL1Q6IS14 154 aaKnown RBP5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 DUX4L9Q6RFH8 374 aaPredicted RBP5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 SLC25A48Q6ZT89 311 aaKnown RBP5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 H2BFWTQ7Z2G1 175 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 KCNRGQ8N5I3 272 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 FAM71E2Q8N5Q1 922 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 LINC00311Q8N616 119 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 OR11H4Q8NGC9 324 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 OR8H1Q8NGG4 311 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 OR13D1Q8NGV5 346 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 C8orf46Q8TAG6 207 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF596Q8TC21 504 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 RAB40CQ96S21 281 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 ARPC5LQ9BPX5 153 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 C1RLQ9NZP8 487 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 CTSZQ9UBR2 303 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 TNFSF18Q9UNG2 199 aa5.75□□□□□ -1.49
DEPDC4-208ENST00000549341 A0A087X0M5 115 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 A0A1B0GX30 115 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 MEX3AA1L020 520 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 C17orf98A8MV24 154 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 F5H0A9 414 aaPredicted RBP5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 G3V3Q6 166 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 J3QR06 171 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 RGS13O14921 159 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 EREGO14944 169 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 TXNL1O43396 289 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 BCL2L11O43521 198 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 ENSAO43768 121 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 FCGR3BO75015 233 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 RBMXL2O75526 392 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 FOXH1O75593 365 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 IGLV2-14P01704 120 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 IGHV1-8P0DP01 117 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 NQO2P16083 231 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 CCL3L1P16619 93 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 RPP30P78346 268 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF816Q0VGE8 651 aaPredicted RBP5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 Q5BKY6 102 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 NMSQ5H8A3 153 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 CT45A1Q5HYN5 189 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 BTNL3Q6UXE8 466 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 BRD3OSQ6XYD6 125 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 TCF23Q7RTU1 214 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 REC114Q7Z4M0 266 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 FOXRED2Q8IWF2 684 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 ABHD12Q8N2K0 398 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 FGFRL1Q8N441 504 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 DMBX1Q8NFW5 382 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 OR4D5Q8NGN0 318 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 CT45A3Q8NHU0 189 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 LHFPL5Q8TAF8 219 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 GPR146Q96CH1 333 aa5.74□□□□□ -1.49
DEPDC4-208ENST00000549341 AQP10Q96PS8 301 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms