RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 DOCK11Q5JSL3 2073 aa16.15■□□□□ 0.18
CTDSP2-204ENST00000548823 DVL1O14640 695 aa16.14■□□□□ 0.17
CTDSP2-204ENST00000548823 HPRT1P00492 218 aa16.14■□□□□ 0.17
CTDSP2-204ENST00000548823 TAS2R30P59541 319 aa16.14■□□□□ 0.17
CTDSP2-204ENST00000548823 BAXQ07812 192 aa16.14■□□□□ 0.17
CTDSP2-204ENST00000548823 TMEM200BQ69YZ2 307 aa16.14■□□□□ 0.17
CTDSP2-204ENST00000548823 BTNL3Q6UXE8 466 aa16.14■□□□□ 0.17
CTDSP2-204ENST00000548823 MMP26Q9NRE1 261 aa16.14■□□□□ 0.17
CTDSP2-204ENST00000548823 BORCS7-ASMTA0A0B4J1R7 106 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 M0R1X1 148 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 FGF16O43320 207 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 RAMP3O60896 148 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 THBS3P49746 956 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 EWSR1Q01844 656 aaKnown RBP eCLIP16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 ZNF273Q14593 569 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 NCR3LG1Q68D85 454 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 ZNF596Q8TC21 504 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 DDB2Q92466 427 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 ZNF251Q9BRH9 671 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 WSB1Q9Y6I7 421 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 FAM181BA6NEQ2 426 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 SLC31A2O15432 143 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 SYNGR2O43760 224 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 CHST1O43916 411 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 SSSCA1O60232 199 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 MED6O75586 246 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 S1PR2O95136 353 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 PAX9P55771 341 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 RPL23AP62750 156 aaKnown RBP16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 RPL7L1Q6DKI1 246 aaKnown RBP16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 C9orf139Q6ZV77 190 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 ODF3L1Q8IXM7 274 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 LINC00311Q8N616 119 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 TMEM252Q8N6L7 170 aa16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 POLR3KQ9Y2Y1 108 aaPredicted RBP16.13■□□□□ 0.17
CTDSP2-204ENST00000548823 A0A087X0M5 115 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 A0A1B0GX30 115 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 CLPSL1A2RUU4 121 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 ANKRD34BA5PLL1 514 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 CRYBA1P05813 215 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 NFYBP25208 207 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 DLX6P56179 175 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 ZNF816Q0VGE8 651 aaPredicted RBP16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 AARDQ4LEZ3 155 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 TMEM155Q4W5P6 130 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 PRAMEF5Q5TYX0 476 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 COMMD7Q86VX2 200 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 SMIM8Q96KF7 97 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 MAGT1Q9H0U3 335 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 HSPB7Q9UBY9 170 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 CACFD1Q9UGQ2 172 aa16.12■□□□□ 0.17
CTDSP2-204ENST00000548823 SAA2-SAA4A0A096LPE2 208 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 IGSF23A1L1A6 192 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 FAM24AA6NFZ4 105 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 MMP23AO75900 390 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 NDUFA7O95182 113 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 LY86O95711 162 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 TMEM50AO95807 157 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 SAA2P0DJI9 122 aaPredicted RBP16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 KRTAP10-3P60369 221 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 RPL39P5Q59GN2 51 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 FAM71F2Q6NXP2 309 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 H2BFWTQ7Z2G1 175 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 RNF141Q8WVD5 230 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 H1FXQ92522 213 aaKnown RBP16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 S1PR3Q99500 378 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 MIOXQ9UGB7 285 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 PFDN2Q9UHV9 154 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 INSIG2Q9Y5U4 225 aa16.11■□□□□ 0.17
CTDSP2-204ENST00000548823 TSPAN15O95858 294 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 KRASP01116 189 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 G6PCP35575 357 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 CAV2P51636 162 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 NHLH2Q02577 135 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 BEAN1Q3B7T3 259 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 OR2B11Q5JQS5 317 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 ZNF841Q6ZN19 808 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 OR4S2Q8NH73 311 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 C8orf46Q8TAG6 207 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 R3HDM4Q96D70 268 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 GINS3Q9BRX5 216 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 C1RLQ9NZP8 487 aa16.1■□□□□ 0.17
CTDSP2-204ENST00000548823 HOXA3O43365 443 aaPredicted RBP16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 TXNL1O43396 289 aa16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 FCGR3BO75015 233 aa16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 RBP4P02753 201 aa16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 RELBQ01201 579 aa16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 TAGLNQ01995 201 aaKnown RBP16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 TNFRSF9Q07011 255 aa16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 ZNF266Q14584 549 aa16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 IZUMO4Q1ZYL8 232 aa16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 REC114Q7Z4M0 266 aa16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 EIF4E3Q8N5X7 224 aaKnown RBP16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 PCNPQ8WW12 178 aaKnown RBP16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 SAT2Q96F10 170 aaPredicted RBP16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 SOX21Q9Y651 276 aaPredicted RBP16.09■□□□□ 0.17
CTDSP2-204ENST00000548823 MARCH11A6NNE9 402 aa16.08■□□□□ 0.16
CTDSP2-204ENST00000548823 SEC11BP0C7V7 166 aa16.08■□□□□ 0.16
CTDSP2-204ENST00000548823 CCL3L1P16619 93 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms