RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 OR1S1Q8NH92 325 aa12.67□□□□□ -0.38
TRAFD1-203ENST00000547063 TMEM167AQ8TBQ9 72 aa12.67□□□□□ -0.38
TRAFD1-203ENST00000547063 PIFOQ8TCI5 191 aa12.67□□□□□ -0.38
TRAFD1-203ENST00000547063 GPR146Q96CH1 333 aa12.67□□□□□ -0.38
TRAFD1-203ENST00000547063 RANBP3Q9H6Z4 567 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-203ENST00000547063 ZFP57Q9NU63 452 aa12.67□□□□□ -0.38
TRAFD1-203ENST00000547063 METTL1Q9UBP6 276 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-203ENST00000547063 CACNG5Q9UF02 275 aa12.67□□□□□ -0.38
TRAFD1-203ENST00000547063 PRNDQ9UKY0 176 aa12.67□□□□□ -0.38
TRAFD1-203ENST00000547063 SOX21Q9Y651 276 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-203ENST00000547063 VPS13CQ709C8 3753 aa12.67□□□□□ -0.38
TRAFD1-203ENST00000547063 NCBP2LA6PVI3 153 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 UPK2O00526 184 aa12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 GIPP09681 153 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 CXCL3P19876 107 aa12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 MAS1LP35410 378 aa12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 FOXRED2Q8IWF2 684 aa12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 MMD2Q8IY49 270 aa12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 OR11H7Q8NGC8 314 aa12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 RBM14Q96PK6 669 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 SLC25A33Q9BSK2 321 aa12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 NMES1Q9C002 83 aa12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 ZNF436Q9C0F3 470 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 SIGLEC9Q9Y336 463 aa12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 MOB4Q9Y3A3 225 aa12.66□□□□□ -0.38
TRAFD1-203ENST00000547063 SONP18583 2426 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 A0A0G2JRQ6 117 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 MDFIC2A0A1B0GVS7 189 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 A6NDX4 124 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 FAM90A26D6RGX4 464 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 FGF16O43320 207 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 ACTL6BO94805 426 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 IL6RP08887 468 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 H2BFSP57053 126 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 RAP2BP61225 183 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 RPL8P62917 257 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 RELBQ01201 579 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 SRSF4Q08170 494 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 C5orf64Q2M2E5 130 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 C2orf68Q2NKX9 166 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 AKAP14Q86UN6 197 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 ZNF429Q86V71 674 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 PPP1R27Q86WC6 154 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 ZBTB8BQ8NAP8 495 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 RITA1Q96K30 269 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 OR10C1Q96KK4 312 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 RASL11BQ9BPW5 248 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 GSKIPQ9P0R6 139 aa12.65□□□□□ -0.38
TRAFD1-203ENST00000547063 C15orf61A6NNL5 157 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 CCNKO75909 580 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 SIX6O95475 246 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 IGHV4-59P01825 116 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 CRYGBP07316 175 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 OR9G9P0C7N8 305 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 CNTFRP26992 372 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 F2RL1P55085 397 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 SIGLECL1Q8N7X8 197 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 OR5B3Q8NH48 314 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 ZNF418Q8TF45 676 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 ZNF48Q96MX3 618 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 COMMD5Q9GZQ3 224 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 FBXL15Q9H469 300 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 GSX1Q9H4S2 264 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 PLSCR3Q9NRY6 295 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 TMEM14BQ9NUH8 114 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 VPREB3Q9UKI3 123 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 FOXA2Q9Y261 457 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 ZNF257Q9Y2Q1 563 aa12.64□□□□□ -0.39
TRAFD1-203ENST00000547063 MPTX1A8MV57 137 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 PITX3O75364 302 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 MED6O75586 246 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 PET100P0DJ07 73 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 NKX2-1P43699 371 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 FGL1Q08830 312 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 LY6EQ16553 131 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 PRSS8Q16651 343 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 AARDQ4LEZ3 155 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 Q6ZRM9 215 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 FAM71E2Q8N5Q1 922 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 OR4D5Q8NGN0 318 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 OR52E5Q8NH55 327 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 FYTTD1Q96QD9 318 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 JMJD8Q96S16 334 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 CHIAQ9BZP6 476 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 HIVEP1P15822 2718 aa12.63□□□□□ -0.39
TRAFD1-203ENST00000547063 INAFM1C9JVW0 142 aa12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 HOXA3O43365 443 aaPredicted RBP12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 LY86O95711 162 aa12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 FAM157CP0CG43 387 aa12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 CD83Q01151 205 aa12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 IZUMO4Q1ZYL8 232 aa12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 Q71RC1 249 aaPredicted RBP12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 TMEM219Q86XT9 240 aa12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 MRPL41Q8IXM3 137 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 Q8N9W7 124 aa12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 ZNF430Q9H8G1 570 aaPredicted RBP12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 F8P00451 2351 aa12.62□□□□□ -0.39
TRAFD1-203ENST00000547063 WRBO00258 174 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 ST8SIA3O43173 380 aa12.61□□□□□ -0.39
TRAFD1-203ENST00000547063 PFDN1O60925 122 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms