RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 OR8B3Q8NGG8 313 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 GRAMD2BQ96HH9 432 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 SLC25A33Q9BSK2 321 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 IGLV3-32A0A0A0MS00 114 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 C17orf98A8MV24 154 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 SLC17A3O00476 420 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 RRHO14718 337 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 CCL8P80075 99 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 GATAD1Q8WUU5 269 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 OR8B2Q96RD0 313 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 IMMP2LQ96T52 175 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 MS4A5Q9H3V2 200 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 DOCK6Q96HP0 2047 aa10.36□□□□□ -0.75
NPC1L1-204ENST00000546276 FREM3P0C091 2139 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 TRAV9-1A0A075B6T8 112 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 A0A1B0GW64 132 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 ATP5IP56385 69 aaPredicted RBP10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 OPN3Q9H1Y3 402 aaPredicted RBP10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 WDR81Q562E7 1941 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 IGLV3-12A0A075B6K2 115 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 SCO2A0A1W2PP80 73 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 A0A1W2PRD5 423 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 A0A1W2PRF3 423 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 A0A1W2PRM7 423 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 PRR33A8MZF0 331 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 MMDQ15546 238 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 SCGB1D4Q6XE38 83 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 PPP1R32Q7Z5V6 425 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 CLEC5AQ9NY25 188 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 HEATR5BQ9P2D3 2071 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 CA7P43166 264 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 PCP4P48539 62 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 HOXA4Q00056 320 aaPredicted RBP10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 HCP5Q6MZN7 132 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 LEAP2Q969E1 77 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 SSBP3Q9BWW4 388 aaPredicted RBP10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 TMEM189A5PLL7 270 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 ADCYAP1P18509 176 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 LGALS7P47929 136 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 JOSD1Q15040 202 aaPredicted RBP10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 PCSK4Q6UW60 755 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 HIST3H2BBQ8N257 126 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 MYOZ3Q8TDC0 251 aa10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 TBL2Q9Y4P3 447 aaKnown RBP10.35□□□□□ -0.75
NPC1L1-204ENST00000546276 BTF3P20290 206 aaKnown RBP10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 STPG1Q5TH74 334 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 SHISA5Q8N114 240 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 HIST1H2BLQ99880 126 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 MRPL37Q9BZE1 423 aaKnown RBP10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 HSPB7Q9UBY9 170 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 WNT9BO14905 357 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 HLA-DRB1P01911 266 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 CXCL1P09341 107 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 OTX1P32242 354 aaPredicted RBP10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 UQCRFS1P47985 274 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 OR51G1Q8NGK1 321 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 MBD3L1Q8WWY6 194 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 RAB1BQ9H0U4 201 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 TMEM242Q9NWH2 141 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 TP53BP1Q12888 1972 aaPredicted RBP10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 C16orf97H3BN30 126 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 IFNL4K9M1U5 179 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 M0QZ24 198 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 GOSR1O95249 250 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 FOXJ2Q9P0K8 574 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 MYLKQ15746 1914 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 PLXNA3P51805 1871 aa10.34□□□□□ -0.75
NPC1L1-204ENST00000546276 TRBV24-1A0A075B6N3 115 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 STARD6P59095 220 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 CYB5R2Q6BCY4 276 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 WDR31Q8NA23 367 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 GTF3AQ92664 365 aaKnown RBP10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 DIRC2Q96SL1 478 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 SLX1AQ9BQ83 275 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 PILRBQ9UKJ0 227 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 SCN8AQ9UQD0 1980 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 FAM90A27PA6NNH2 459 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 CGAP01215 116 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 TCTAP57738 103 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 FHL1Q13642 323 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 KRTCAP3Q53RY4 240 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 RPL39P5Q59GN2 51 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 AKIRIN1Q9H9L7 192 aaPredicted RBP10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 C1RLQ9NZP8 487 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 TRIOBPQ9H2D6 2365 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 BMI1P35226 326 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 HERVK_113P61574 105 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 QRFPP83859 136 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 KIR2DL2P43627 348 aaPredicted RBP10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 TMEM30BQ3MIR4 351 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 ACP7Q6ZNF0 438 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 KLHDC3Q9BQ90 382 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 MIEN1Q9BRT3 115 aa10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 RSPO3Q9BXY4 272 aaPredicted RBP10.33□□□□□ -0.76
NPC1L1-204ENST00000546276 RPL7P18124 248 aaKnown RBP10.32□□□□□ -0.76
NPC1L1-204ENST00000546276 TWIST1Q15672 202 aa10.32□□□□□ -0.76
NPC1L1-204ENST00000546276 WBP1Q96G27 269 aa10.32□□□□□ -0.76
NPC1L1-204ENST00000546276 IMMP1LQ96LU5 166 aa10.32□□□□□ -0.76
NPC1L1-204ENST00000546276 ZNF703Q9H7S9 590 aaPredicted RBP10.32□□□□□ -0.76
NPC1L1-204ENST00000546276 TSC2P49815 1807 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms