RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 COL6A3P12111 3177 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 hDV102S1A0JD36 115 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 SYNGR3O43761 229 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 CD5LO43866 347 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 NAPSAO96009 420 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 CCL3P10147 92 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 CEBPDP49716 269 aaPredicted RBP6.63□□□□□ -1.35
UBR1-202ENST00000546274 HTD2P86397 168 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 Q0VG73 95 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 IZUMO4Q1ZYL8 232 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 KRTAP27-1Q3LI81 207 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 ACSF3Q4G176 576 aaPredicted RBP6.63□□□□□ -1.35
UBR1-202ENST00000546274 CCDC144NLQ6NUI1 221 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 RAB37Q96AX2 223 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 SRXN1Q9BYN0 137 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 WDR54Q9H977 334 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 SH2D2AQ9NP31 389 aa6.63□□□□□ -1.35
UBR1-202ENST00000546274 C11orf94C9JXX5 98 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 IGKV1D-33P01593 117 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 IGKV1-33P01594 117 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 IAPPP10997 89 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 LIFP15018 202 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 USF1P22415 310 aaPredicted RBP6.62□□□□□ -1.35
UBR1-202ENST00000546274 SRIP30626 198 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 RPS18P62269 152 aaKnown RBP6.62□□□□□ -1.35
UBR1-202ENST00000546274 LTC4SQ16873 150 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 PIGYQ3MUY2 71 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 FAM27BQ5VT28 67 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 OR5D13Q8NGL4 314 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 C19orf24Q9BVV8 132 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 NECAP2Q9NVZ3 263 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 OCIAD1Q9NX40 245 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 PLEK2Q9NYT0 353 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 LOC102723996A0A087X1L8 192 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 IGHV1-45A0A0A0MS14 117 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 GAGE12HA6NDE8 117 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 PDE6DO43924 150 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 NBL1P41271 181 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 IGFBP7Q16270 282 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 TMEM42Q69YG0 159 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 ZNF324BQ6AW86 544 aaPredicted RBP6.62□□□□□ -1.35
UBR1-202ENST00000546274 WDR5BQ86VZ2 330 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 QTRT1Q9BXR0 403 aaKnown RBP6.62□□□□□ -1.35
UBR1-202ENST00000546274 C11orf1Q9H5F2 150 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 ZNF318Q5VUA4 2279 aa6.62□□□□□ -1.35
UBR1-202ENST00000546274 A0A0J9YW62 118 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 C3orf85A0A1B0GTC6 90 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 A0A1B0GW15 77 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 SIRPB1O00241 398 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 VENTXO95231 258 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 CLDN1O95832 211 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 SP9P0CG40 484 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 SSTR5P35346 364 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 C5orf64Q2M2E5 130 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 SLC25A34Q6PIV7 304 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 NEGR1Q7Z3B1 354 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 NINJ1Q92982 152 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 SPSB1Q96BD6 273 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 SPIN2AQ99865 258 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 SPIN2BQ9BPZ2 258 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 A0A0G2JMM0 328 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 UBE2L5PA0A1B0GUS4 154 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 A0A1W2PPB8 328 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 KIR3DP1A8MWS1 328 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 TNFSF11O14788 317 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 HERV-K104P61576 105 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 TCF15Q12870 199 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 SPATA31B1PQ5VZV4 182 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 OR10G8Q8NGN5 311 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 SLC25A40Q8TBP6 338 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 TSKUQ8WUA8 353 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 SPTSSAQ969W0 71 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 IMMP1LQ96LU5 166 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 ULBP2Q9BZM5 246 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 HIF1ANQ9NWT6 349 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 PGPEP1Q9NXJ5 209 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 C19orf25Q9UFG5 118 aaPredicted RBP6.61□□□□□ -1.35
UBR1-202ENST00000546274 SLC22A20A6NK97 555 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 H0Y8G0 127 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 HSBP1O75506 76 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 MGST1P10620 155 aaKnown RBP6.61□□□□□ -1.35
UBR1-202ENST00000546274 COX6A1P12074 109 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 DSCR4P56555 118 aaPredicted RBP6.61□□□□□ -1.35
UBR1-202ENST00000546274 PSG3Q16557 428 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 OR2K2Q8NGT1 345 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 OR2V2Q96R30 315 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 JMJD8Q96S16 334 aa6.61□□□□□ -1.35
UBR1-202ENST00000546274 PCSK5Q92824 1860 aa6.6□□□□□ -1.35
UBR1-202ENST00000546274 TNRC6AQ8NDV7 1962 aaKnown RBP6.6□□□□□ -1.35
UBR1-202ENST00000546274 J3KRW8 73 aa6.6□□□□□ -1.35
UBR1-202ENST00000546274 K7ESF4 209 aa6.6□□□□□ -1.35
UBR1-202ENST00000546274 M0R2Z0 102 aa6.6□□□□□ -1.35
UBR1-202ENST00000546274 ADH4P08319 380 aa6.6□□□□□ -1.35
UBR1-202ENST00000546274 PATE4P0C8F1 98 aa6.6□□□□□ -1.35
UBR1-202ENST00000546274 PAX9P55771 341 aa6.6□□□□□ -1.35
UBR1-202ENST00000546274 TCL1AP56279 114 aa6.6□□□□□ -1.35
UBR1-202ENST00000546274 B3GALT5-AS1P59052 145 aa6.6□□□□□ -1.35
UBR1-202ENST00000546274 ARL16Q0P5N6 197 aa6.6□□□□□ -1.35
UBR1-202ENST00000546274 UFSP1Q6NVU6 142 aa6.6□□□□□ -1.35
UBR1-202ENST00000546274 EBLN2Q6P2I7 272 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms