RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 COX5AP20674 150 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 GALR1P47211 349 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 ID3Q02535 119 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 BSXQ3C1V8 233 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 C16orf82Q7Z2V1 217 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 PCGF1Q9BSM1 259 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 C1QTNF5Q9BXJ0 243 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 COL12A1Q99715 3063 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 FTH1P19P0C7X4 201 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 GFRA1P56159 465 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 HTD2P86397 168 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 ARL16Q0P5N6 197 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 C9orf106Q8NAJ2 232 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 RAB24Q969Q5 203 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 RCC1LQ96I51 464 aaKnown RBP8.25□□□□□ -1.09
TRAF1-203ENST00000546084 TMEM56Q96MV1 263 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 TMEM208Q9BTX3 173 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 VAX2Q9UIW0 290 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 TMEM56-RWDD3S4R434 201 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 A6NNC1 897 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 NDUFB4O95168 129 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 IGLV3-1P01715 115 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 CECR9P0C854 216 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 CD33P20138 364 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 PRDX2P32119 198 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 STUMQ69YW2 141 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 KIR3DL3Q8N743 410 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 OR4X1Q8NH49 305 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 IL22RA2Q969J5 263 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 HSD17B10Q99714 261 aaKnown RBP8.24□□□□□ -1.09
TRAF1-203ENST00000546084 ACTR3CQ9C0K3 210 aaPredicted RBP8.24□□□□□ -1.09
TRAF1-203ENST00000546084 PRDM14Q9GZV8 571 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 TRAV17A0A0B4J275 112 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 A0A1B0GW64 132 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 REG1AP05451 166 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 UCP1P25874 307 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 RPL30P62888 115 aaKnown RBP8.24□□□□□ -1.09
TRAF1-203ENST00000546084 SNRNP40Q96DI7 357 aaKnown RBP8.24□□□□□ -1.09
TRAF1-203ENST00000546084 FGF23Q9GZV9 251 aaPredicted RBP8.24□□□□□ -1.09
TRAF1-203ENST00000546084 POLQO75417 2590 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 TRGV8A0A0C4DH27 118 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 A0A1B0GU03 582 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 MDFIC2A0A1B0GVS7 189 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 C11orf94C9JXX5 98 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 COX7A1P24310 79 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 NHLH1Q02575 133 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 ZNF90Q03938 601 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 ATP6V1FQ16864 119 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 BAGE3Q86Y29 109 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 BAGE2Q86Y30 109 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 BLNKQ8WV28 456 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 RNF2Q99496 336 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 CBLN4Q9NTU7 201 aa8.24□□□□□ -1.09
TRAF1-203ENST00000546084 CHD3Q12873 2000 aaKnown RBP8.23□□□□□ -1.09
TRAF1-203ENST00000546084 ODAMA1E959 279 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 C1QTNF9BB2RNN3 333 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 TMEM238C9JI98 176 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 KIAA1644Q3SXP7 199 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 MRGPRGQ86SM5 289 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 OR4P4Q8NGL7 312 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 OR10X1Q8NGY0 326 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 SDF2L1Q9HCN8 221 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 A0A1B0GV72 72 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 ETV2O00321 342 aaPredicted RBP8.23□□□□□ -1.09
TRAF1-203ENST00000546084 HES1Q14469 280 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 NMSQ5H8A3 153 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 FAM90A2PQ658T7 463 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 OR8G5Q8NG78 346 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 TECTBQ96PL2 329 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 NEU1Q99519 415 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 QTRT1Q9BXR0 403 aaKnown RBP8.23□□□□□ -1.09
TRAF1-203ENST00000546084 SEMA5BQ9P283 1151 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 NAT8Q9UHE5 227 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 ARHGAP32A7KAX9 2087 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 SORL1Q92673 2214 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 GRIFINA4D1Z8 144 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 TNFAIP6P98066 277 aaPredicted RBP8.23□□□□□ -1.09
TRAF1-203ENST00000546084 RAB31Q13636 194 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 OR1P1Q8NH06 330 aa8.23□□□□□ -1.09
TRAF1-203ENST00000546084 CISD1Q9NZ45 108 aaKnown RBP8.23□□□□□ -1.09
TRAF1-203ENST00000546084 NAV3Q8IVL0 2385 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 A0A1W2PNU3 283 aaPredicted RBP8.22□□□□□ -1.09
TRAF1-203ENST00000546084 H0Y980 276 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 LINC00614P0C842 121 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 CD59P13987 128 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 P2RY6Q15077 328 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 Q6ZPA2 131 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 FAM216BQ8N7L0 139 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 TAF15Q92804 592 aaKnown RBP eCLIP8.22□□□□□ -1.09
TRAF1-203ENST00000546084 TMEM18Q96B42 140 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 S4R3C0 116 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 USP9XQ93008 2570 aaPredicted RBP8.22□□□□□ -1.09
TRAF1-203ENST00000546084 TRAV34A0A0B4J273 112 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 FAM90A27PA6NNH2 459 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 K7ERU9 68 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 TCTAP57738 103 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 MEF2BQ02080 365 aaPredicted RBP8.22□□□□□ -1.09
TRAF1-203ENST00000546084 TMEM183AQ8IXX5 376 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 PLSCR2Q9NRY7 297 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 LAMA5O15230 3695 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms