RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 TMEM56Q96MV1 263 aa9.4□□□□□ -0.9
LTBR-214ENST00000545445 PRSS22Q9GZN4 317 aa9.4□□□□□ -0.9
LTBR-214ENST00000545445 METTL1Q9UBP6 276 aaKnown RBP9.4□□□□□ -0.9
LTBR-214ENST00000545445 FLVCR2Q9UPI3 526 aa9.4□□□□□ -0.9
LTBR-214ENST00000545445 TMEM56-RWDD3S4R434 201 aa9.4□□□□□ -0.9
LTBR-214ENST00000545445 TRAV6A0A075B6T7 132 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 MARCH11A6NNE9 402 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 SRRM4A7MD48 611 aaKnown RBP9.39□□□□□ -0.91
LTBR-214ENST00000545445 SLC25A17O43808 307 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 PRAF2O60831 178 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 OR2A4O95047 310 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 SFT2D2O95562 160 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 HLA-DRB1P01911 266 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 PRB2P02812 416 aaPredicted RBP9.39□□□□□ -0.91
LTBR-214ENST00000545445 ANXA7P20073 488 aaKnown RBP9.39□□□□□ -0.91
LTBR-214ENST00000545445 SUPT4H1P63272 117 aaKnown RBP9.39□□□□□ -0.91
LTBR-214ENST00000545445 RELBQ01201 579 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 PPP1R1AQ13522 171 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 TMEM187Q14656 261 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 SP6Q3SY56 376 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 C4orf46Q504U0 113 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 PPP1R27Q86WC6 154 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 ZNF695Q8IW36 515 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 LGI3Q8N145 548 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 DMBX1Q8NFW5 382 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 FAM110DQ8TAY7 271 aaPredicted RBP9.39□□□□□ -0.91
LTBR-214ENST00000545445 RBPMSQ93062 196 aaKnown RBP9.39□□□□□ -0.91
LTBR-214ENST00000545445 R3HDM4Q96D70 268 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 OR2A7Q96R45 310 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 MARVELD1Q9BSK0 173 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 FBXL15Q9H469 300 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 BET1LQ9NYM9 111 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 SIGLEC9Q9Y336 463 aa9.39□□□□□ -0.91
LTBR-214ENST00000545445 DUXBA0A1W2PPF3 345 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 C9orf170A2RU37 121 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 INMT-MINDY4F8WBC2 141 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 TSPAN9O75954 239 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 NDUFA7O95182 113 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 DUS4LO95620 317 aaKnown RBP9.38□□□□□ -0.91
LTBR-214ENST00000545445 DHFRP00374 187 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 KRASP01116 189 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 HLA-AP01891 365 aaKnown RBP9.38□□□□□ -0.91
LTBR-214ENST00000545445 AMY1AP04745 511 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 IL5P05113 134 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 CRYGBP07316 175 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 SAA1P0DJI8 122 aaPredicted RBP9.38□□□□□ -0.91
LTBR-214ENST00000545445 CNTFRP26992 372 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 MAS1LP35410 378 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 RAB25P57735 213 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 DHRS2Q13268 280 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 LYG2Q86SG7 212 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 FAM219AQ8IW50 185 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 MMD2Q8IY49 270 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 PUSL1Q8N0Z8 303 aaKnown RBP9.38□□□□□ -0.91
LTBR-214ENST00000545445 Q8N2B8 174 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 LRTM2Q8N967 370 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 COQ8AQ8NI60 647 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 TMEM167AQ8TBQ9 72 aa9.38□□□□□ -0.91
LTBR-214ENST00000545445 RRNAD1Q96FB5 475 aaKnown RBP9.38□□□□□ -0.91
LTBR-214ENST00000545445 A0A0B4J2A0 478 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 CLPSL1A2RUU4 121 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 KBTBD11O94819 623 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 IGKV1-39P01597 117 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 IGHG2P01859 326 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 IGKV1D-39P04432 117 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
LTBR-214ENST00000545445 G6PCP35575 357 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 AKR1C2P52895 323 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 BLCAPP62952 87 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 PRSS8Q16651 343 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 TMEM268Q5VZI3 342 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 OR4A47Q6IF82 309 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 ZNF562Q6V9R5 426 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 H2BFWTQ7Z2G1 175 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 MINDY2Q8NBR6 621 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 LSM10Q969L4 123 aaKnown RBP9.37□□□□□ -0.91
LTBR-214ENST00000545445 SEC22AQ96IW7 307 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 PHB2Q99623 299 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 C16orf95Q9H693 158 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 GPN1Q9HCN4 374 aaPredicted RBP9.37□□□□□ -0.91
LTBR-214ENST00000545445 TMEM140Q9NV12 185 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 CACFD1Q9UGQ2 172 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 SHPKQ9UHJ6 478 aa9.37□□□□□ -0.91
LTBR-214ENST00000545445 G3V4G9 280 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 UPK2O00526 184 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 SNAPC5O75971 98 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 ACTL6BO94805 426 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 VDAC1P21796 283 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 BEAN1Q3B7T3 259 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 SSX9Q7RTT3 188 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 SLC35E3Q7Z769 313 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 SELENOHQ8IZQ5 122 aaKnown RBP9.36□□□□□ -0.91
LTBR-214ENST00000545445 VKORC1L1Q8N0U8 176 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 OR2T6Q8NHC8 308 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 RNASE11Q8TAA1 199 aaKnown RBP9.36□□□□□ -0.91
LTBR-214ENST00000545445 ZNF431Q8TF32 576 aaPredicted RBP9.36□□□□□ -0.91
LTBR-214ENST00000545445 CASTOR1Q8WTX7 329 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 MITD1Q8WV92 249 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 RBMXL1Q96E39 390 aaKnown RBP9.36□□□□□ -0.91
LTBR-214ENST00000545445 ZNF702PQ9H963 129 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms