RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ADAP1O75689 374 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 VENTXO95231 258 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 LY86O95711 162 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 IGKV1-39P01597 117 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 IGKV1D-39P04432 117 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 G6PCP35575 357 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 SRP14P37108 136 aaKnown RBP7.64□□□□□ -1.19
YBX3-215ENST00000544504 BRWD1-AS2P59051 145 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 UBE2KP61086 200 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 SRSF4Q08170 494 aaKnown RBP7.64□□□□□ -1.19
YBX3-215ENST00000544504 EBI3Q14213 229 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 HES1Q14469 280 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 LRRC75BQ2VPJ9 315 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 LDLRAD2Q5SZI1 272 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 RUSC1-AS1Q66K80 236 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 BRD3OSQ6XYD6 125 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 TEX45Q8NA69 505 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 OR4A16Q8NH70 328 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 PPP1R14BQ96C90 147 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 RANBP3Q9H6Z4 567 aaPredicted RBP7.64□□□□□ -1.19
YBX3-215ENST00000544504 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.64□□□□□ -1.19
YBX3-215ENST00000544504 PRR13Q9NZ81 148 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 KIAA1456Q9P272 454 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 PRNDQ9UKY0 176 aa7.64□□□□□ -1.19
YBX3-215ENST00000544504 NOTCH1P46531 2555 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 IGHV3OR16-10A0A075B7F0 116 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 IGHV3-72A0A0B4J1Y9 119 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 A0A0U1RQK1 487 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 BTBD17A6NE02 478 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 CCSO14618 274 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 RBMXL2O75526 392 aaKnown RBP7.63□□□□□ -1.19
YBX3-215ENST00000544504 MED6O75586 246 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 IGKV1D-33P01593 117 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 IGKV1-33P01594 117 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 IGKV1-5P01602 117 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 RLN2P04090 185 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 IGKV1-16P04430 117 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 SNRNP70P08621 437 aaKnown RBP7.63□□□□□ -1.19
YBX3-215ENST00000544504 P0C879 139 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 CXCL3P19876 107 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 H2BFSP57053 126 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 LINC00205P59089 165 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 CD83Q01151 205 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 C16orf82Q7Z2V1 217 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 FOXRED2Q8IWF2 684 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 MMD2Q8IY49 270 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 TCTE3Q8IZS6 198 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 ZBTB8BQ8NAP8 495 aaPredicted RBP7.63□□□□□ -1.19
YBX3-215ENST00000544504 OR5R1Q8NH85 324 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 OR1S1Q8NH92 325 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 ZDHHC16Q969W1 377 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 GPR146Q96CH1 333 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 AJUBAQ96IF1 538 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 EAF1Q96JC9 268 aaPredicted RBP7.63□□□□□ -1.19
YBX3-215ENST00000544504 TMEM140Q9NV12 185 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 CACNG5Q9UF02 275 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 VWFP04275 2813 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 NBEAL2Q6ZNJ1 2754 aa7.63□□□□□ -1.19
YBX3-215ENST00000544504 TMEM89A2RUT3 159 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 M0QZK8 103 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 WRBO00258 174 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 NBR2O15453 112 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 KBTBD11O94819 623 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 SAA1P0DJI8 122 aaPredicted RBP7.62□□□□□ -1.19
YBX3-215ENST00000544504 TMEM11P17152 192 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 PVALBP20472 110 aaPredicted RBP7.62□□□□□ -1.19
YBX3-215ENST00000544504 MAS1LP35410 378 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 NKX2-1P43699 371 aaPredicted RBP7.62□□□□□ -1.19
YBX3-215ENST00000544504 C2orf68Q2NKX9 166 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 OR4A47Q6IF82 309 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 SSX9Q7RTT3 188 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 MRPL41Q8IXM3 137 aaKnown RBP7.62□□□□□ -1.19
YBX3-215ENST00000544504 PUSL1Q8N0Z8 303 aaKnown RBP7.62□□□□□ -1.19
YBX3-215ENST00000544504 DYNAPQ8N1N2 210 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 NPBQ8NG41 125 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 TMEM167AQ8TBQ9 72 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 FYTTD1Q96QD9 318 aaKnown RBP7.62□□□□□ -1.19
YBX3-215ENST00000544504 CLCC1Q96S66 551 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 SSX3Q99909 188 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 CHIAQ9BZP6 476 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 GSKIPQ9P0R6 139 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 ZNF257Q9Y2Q1 563 aa7.62□□□□□ -1.19
YBX3-215ENST00000544504 C15orf61A6NNL5 157 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 UPK2O00526 184 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 RRHO14718 337 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 ST8SIA3O43173 380 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 SLC25A17O43808 307 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 ACTL6BO94805 426 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 NDUFA3O95167 84 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 SIX6O95475 246 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 IL6RP08887 468 aaPredicted RBP7.61□□□□□ -1.19
YBX3-215ENST00000544504 PSMB6P28072 239 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 SPCS3P61009 180 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 RPL8P62917 257 aaKnown RBP7.61□□□□□ -1.19
YBX3-215ENST00000544504 PLGLAQ15195 96 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 PSG5Q15238 335 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 MMDQ15546 238 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 AARDQ4LEZ3 155 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 RBMS3Q6XE24 437 aaKnown RBP7.61□□□□□ -1.19
YBX3-215ENST00000544504 ZNF429Q86V71 674 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms