RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 UBE2KP61086 200 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 DYNAPQ8N1N2 210 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 C17orf50Q8WW18 174 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 RITA1Q96K30 269 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 RBKSQ9H477 322 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 C15orf61A6NNL5 157 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 UPK2O00526 184 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 SAA4P35542 130 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 ZNF429Q86V71 674 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 AJUBAQ96IF1 538 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 CACFD1Q9UGQ2 172 aa24.5■■□□□ 1.51
CCM2-219ENST00000544363 TSC22D2O75157 780 aa24.49■■□□□ 1.51
CCM2-219ENST00000544363 TMEM50AO95807 157 aa24.49■■□□□ 1.51
CCM2-219ENST00000544363 PAX9P55771 341 aa24.49■■□□□ 1.51
CCM2-219ENST00000544363 OR52E5Q8NH55 327 aa24.49■■□□□ 1.51
CCM2-219ENST00000544363 FOXA2Q9Y261 457 aaPredicted RBP24.49■■□□□ 1.51
CCM2-219ENST00000544363 VENTXO95231 258 aa24.48■■□□□ 1.51
CCM2-219ENST00000544363 IGHV4-31P0DP07 118 aa24.48■■□□□ 1.51
CCM2-219ENST00000544363 PAX6P26367 422 aa24.48■■□□□ 1.51
CCM2-219ENST00000544363 TMEM249Q2WGJ8 235 aa24.48■■□□□ 1.51
CCM2-219ENST00000544363 GPR157Q5UAW9 335 aa24.48■■□□□ 1.51
CCM2-219ENST00000544363 OR2C3Q8N628 320 aa24.48■■□□□ 1.51
CCM2-219ENST00000544363 VSTM2AQ8TAG5 236 aa24.48■■□□□ 1.51
CCM2-219ENST00000544363 GON7Q9BXV9 100 aa24.48■■□□□ 1.51
CCM2-219ENST00000544363 TMEM14BQ9NUH8 114 aa24.48■■□□□ 1.51
CCM2-219ENST00000544363 IGHV1-69DA0A0B4J2H0 117 aa24.47■■□□□ 1.51
CCM2-219ENST00000544363 IGHV1-69P01742 117 aa24.47■■□□□ 1.51
CCM2-219ENST00000544363 VMA21Q3ZAQ7 101 aa24.47■■□□□ 1.51
CCM2-219ENST00000544363 PIP4P2Q8N4L2 257 aa24.47■■□□□ 1.51
CCM2-219ENST00000544363 OR4A5Q8NH83 315 aa24.47■■□□□ 1.51
CCM2-219ENST00000544363 RNF5Q99942 180 aa24.47■■□□□ 1.51
CCM2-219ENST00000544363 ZC4H2Q9NQZ6 224 aa24.47■■□□□ 1.51
CCM2-219ENST00000544363 LYRM2Q9NU23 88 aaPredicted RBP24.47■■□□□ 1.51
CCM2-219ENST00000544363 PRNDQ9UKY0 176 aa24.47■■□□□ 1.51
CCM2-219ENST00000544363 TRAV40A0A0B4J280 105 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 GPR137BO60478 399 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 KBTBD11O94819 623 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 TGFAP01135 160 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 IFNA17P01571 189 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 IAPPP10997 89 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 SPCS3P61009 180 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 RPL23AP62750 156 aaKnown RBP24.46■■□□□ 1.51
CCM2-219ENST00000544363 IFITM2Q01629 132 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 SMIM8Q96KF7 97 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 FOXC2Q99958 501 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 WSB1Q9Y6I7 421 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 CR1P17927 2039 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 FAM24AA6NFZ4 105 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 CAV2P51636 162 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 PDLIM3Q53GG5 364 aaPredicted RBP24.46■■□□□ 1.51
CCM2-219ENST00000544363 WFDC11Q8NEX6 87 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 TMEM167AQ8TBQ9 72 aa24.46■■□□□ 1.51
CCM2-219ENST00000544363 TSNAXQ99598 290 aaKnown RBP24.46■■□□□ 1.51
CCM2-219ENST00000544363 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP24.45■■□□□ 1.52e-7■■■□□ 15.8
CCM2-219ENST00000544363 KANTRA0A1W2PQU2 76 aa24.45■■□□□ 1.5
CCM2-219ENST00000544363 J3QLI3 93 aa24.45■■□□□ 1.5
CCM2-219ENST00000544363 BCL2L11O43521 198 aa24.45■■□□□ 1.5
CCM2-219ENST00000544363 TAS2R30P59541 319 aa24.45■■□□□ 1.5
CCM2-219ENST00000544363 SLA2Q9H6Q3 261 aa24.45■■□□□ 1.5
CCM2-219ENST00000544363 CEBPZOSA8MTT3 80 aa24.44■■□□□ 1.5
CCM2-219ENST00000544363 DTD1Q8TEA8 209 aa24.44■■□□□ 1.5
CCM2-219ENST00000544363 FKBP11Q9NYL4 201 aa24.44■■□□□ 1.5
CCM2-219ENST00000544363 PSENENQ9NZ42 101 aa24.44■■□□□ 1.5
CCM2-219ENST00000544363 NUP50Q9UKX7 468 aa24.44■■□□□ 1.5
CCM2-219ENST00000544363 IGHV3OR16-10A0A075B7F0 116 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 SLC25A17O43808 307 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 HSPE1P61604 102 aaKnown RBP24.43■■□□□ 1.5
CCM2-219ENST00000544363 RUSC1-AS1Q66K80 236 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 TEX45Q8NA69 505 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 ZDHHC16Q969W1 377 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 ARPC5LQ9BPX5 153 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 SLC25A31Q9H0C2 315 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 TCF19Q9Y242 345 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 OR51B2Q9Y5P1 312 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 MAP1AP78559 2803 aaPredicted RBP24.43■■□□□ 1.5
CCM2-219ENST00000544363 UNC79Q9P2D8 2635 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 IGKV1D-33P01593 117 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 IGKV1-33P01594 117 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 CNTFRP26992 372 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 PSG5Q15238 335 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 SPINK9Q5DT21 86 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 TMEM252Q8N6L7 170 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 CIB3Q96Q77 187 aaPredicted RBP24.43■■□□□ 1.5
CCM2-219ENST00000544363 ZNF257Q9Y2Q1 563 aa24.43■■□□□ 1.5
CCM2-219ENST00000544363 PRRC2AP48634 2157 aaKnown RBP24.42■■□□□ 1.5
CCM2-219ENST00000544363 IGSF23A1L1A6 192 aa24.42■■□□□ 1.5
CCM2-219ENST00000544363 MOSP00540 346 aa24.42■■□□□ 1.5
CCM2-219ENST00000544363 AVPP01185 164 aa24.42■■□□□ 1.5
CCM2-219ENST00000544363 IGHV4-38-2P0DP08 117 aa24.42■■□□□ 1.5
CCM2-219ENST00000544363 EWSR1Q01844 656 aaKnown RBP eCLIP24.42■■□□□ 1.5
CCM2-219ENST00000544363 CRYGBP07316 175 aa24.41■■□□□ 1.5
CCM2-219ENST00000544363 RPL8P62917 257 aaKnown RBP24.41■■□□□ 1.5
CCM2-219ENST00000544363 PDZD2O15018 2839 aa24.4■■□□□ 1.5
CCM2-219ENST00000544363 H3BP45 60 aa24.4■■□□□ 1.5
CCM2-219ENST00000544363 SNRNP70P08621 437 aaKnown RBP24.4■■□□□ 1.5
CCM2-219ENST00000544363 OR2T10Q8NGZ9 312 aa24.4■■□□□ 1.5
CCM2-219ENST00000544363 EAF1Q96JC9 268 aaPredicted RBP24.4■■□□□ 1.5
CCM2-219ENST00000544363 TET2Q6N021 2002 aaPredicted RBP24.4■■□□□ 1.5
CCM2-219ENST00000544363 LY86O95711 162 aa24.39■■□□□ 1.5
CCM2-219ENST00000544363 FGF2P09038 288 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms