RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 GPR6P46095 362 aaPredicted RBP11.09□□□□□ -0.63
HCFC2-202ENST00000544223 CCL20P78556 96 aa11.09□□□□□ -0.63
HCFC2-202ENST00000544223 SLC38A11Q08AI6 406 aa11.09□□□□□ -0.63
HCFC2-202ENST00000544223 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.09□□□□□ -0.63
HCFC2-202ENST00000544223 HARBI1Q96MB7 349 aa11.09□□□□□ -0.63
HCFC2-202ENST00000544223 HEYLQ9NQ87 328 aaPredicted RBP11.09□□□□□ -0.63
HCFC2-202ENST00000544223 CACFD1Q9UGQ2 172 aa11.09□□□□□ -0.63
HCFC2-202ENST00000544223 A8MXK9 166 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 IFNA10P01566 189 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 CAMLGP49069 296 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 ELLP55199 621 aaPredicted RBP11.08□□□□□ -0.64
HCFC2-202ENST00000544223 TMEM14EPQ6UXP3 125 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 LHFPL4Q7Z7J7 247 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 OR9G1Q8NH87 305 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 ST6GALNAC6Q969X2 333 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 NABP2Q9BQ15 211 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 SSBP3Q9BWW4 388 aaPredicted RBP11.08□□□□□ -0.64
HCFC2-202ENST00000544223 HILPDAQ9Y5L2 63 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 C15orf62A8K5M9 175 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 HMGB3O15347 200 aaKnown RBP11.08□□□□□ -0.64
HCFC2-202ENST00000544223 IGHV4-39P01824 125 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 C19orf35Q6ZS72 473 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 TGIF2LXQ8IUE1 241 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.08□□□□□ -0.64
HCFC2-202ENST00000544223 NEU4Q8WWR8 484 aaPredicted RBP11.08□□□□□ -0.64
HCFC2-202ENST00000544223 MARC2Q969Z3 335 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 MIOXQ9UGB7 285 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 TCF19Q9Y242 345 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 SESN1Q9Y6P5 492 aa11.08□□□□□ -0.64
HCFC2-202ENST00000544223 GCN1Q92616 2671 aaKnown RBP11.08□□□□□ -0.64
HCFC2-202ENST00000544223 PMS2P5A8MQ11 134 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 RBFOX2O43251 390 aaKnown RBP eCLIP11.07□□□□□ -0.64
HCFC2-202ENST00000544223 ATG12O94817 140 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 MMP9P14780 707 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 HOXA1P49639 335 aaPredicted RBP11.07□□□□□ -0.64
HCFC2-202ENST00000544223 BAXQ07812 192 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 ZNF266Q14584 549 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 RTL8BQ17RB0 113 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 SSX7Q7RTT5 188 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 MOB3BQ86TA1 216 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 TCTEX1D1Q8N7M0 179 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 CLCC1Q96S66 551 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 FAM212BQ9NTI7 297 aaPredicted RBP11.07□□□□□ -0.64
HCFC2-202ENST00000544223 STRAPQ9Y3F4 350 aaKnown RBP11.07□□□□□ -0.64
HCFC2-202ENST00000544223 OR51B2Q9Y5P1 312 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 MXRA5Q9NR99 2828 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 TEX15Q9BXT5 2789 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 SEC11BP0C7V7 166 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 EIF5AP63241 154 aaKnown RBP11.07□□□□□ -0.64
HCFC2-202ENST00000544223 ATRAIDQ6UW56 229 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 PATZ1Q9HBE1 687 aaKnown RBP11.07□□□□□ -0.64
HCFC2-202ENST00000544223 GAB2Q9UQC2 676 aa11.07□□□□□ -0.64
HCFC2-202ENST00000544223 LOC105371242A0A075B767 164 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 TRBV23-1A0A0A0MS06 115 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 SMCO3A2RU48 225 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 C15orf61A6NNL5 157 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 SLC25A17O43808 307 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 IGHV3-48P01763 117 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 APOC3P02656 99 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 MLANAQ16655 118 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 NAV2Q8IVL1 2488 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 FAM90A26D6RGX4 464 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 IGLV1-47P01700 117 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 ADCYAP1P18509 176 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 LGALS4P56470 323 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 EIF5AL1Q6IS14 154 aaKnown RBP11.06□□□□□ -0.64
HCFC2-202ENST00000544223 BTNL8Q6UX41 500 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 OR5AN1Q8NGI8 311 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 OR4P4Q8NGL7 312 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 LHX4Q969G2 390 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 FLYWCH2Q96CP2 140 aaKnown RBP11.06□□□□□ -0.64
HCFC2-202ENST00000544223 TREM1Q9NP99 234 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 CUBNO60494 3623 aa11.06□□□□□ -0.64
HCFC2-202ENST00000544223 BUB1B-PAK6H3BSN5 160 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 REG1AP05451 166 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 LIPFP07098 398 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 VDAC2P45880 294 aaPredicted RBP11.05□□□□□ -0.64
HCFC2-202ENST00000544223 EFNA4P52798 201 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 FGF8P55075 233 aaPredicted RBP11.05□□□□□ -0.64
HCFC2-202ENST00000544223 HLA-DRB5Q30154 266 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 HSD17B13Q7Z5P4 300 aaPredicted RBP11.05□□□□□ -0.64
HCFC2-202ENST00000544223 OR10A7Q8NGE5 316 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 PCGF1Q9BSM1 259 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 CLEC7AQ9BXN2 247 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 TMEM14BQ9NUH8 114 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.05□□□□□ -0.644e-6■■■■■ 71
HCFC2-202ENST00000544223 IFNA5P01569 189 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 ARG1P05089 322 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 KIR2DS2P43631 304 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 SPCS3P61009 180 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 LRRC20Q8TCA0 184 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 RARRES2Q99969 163 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 MED9Q9NWA0 146 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 ITPR2Q14571 2701 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 CSPG4Q6UVK1 2322 aa11.05□□□□□ -0.64
HCFC2-202ENST00000544223 TEX50A0A1B0GTY4 177 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 NUPL2O15504 423 aaKnown RBP11.04□□□□□ -0.64
HCFC2-202ENST00000544223 HRASP01112 189 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 APOA2P02652 100 aa11.04□□□□□ -0.64
HCFC2-202ENST00000544223 HBG1P69891 147 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms