RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 DERL2Q9GZP9 239 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 MS4A6AQ9H2W1 248 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 CXorf21Q9HAI6 301 aa0.51□□□□□ -2.33
KNTC1-213ENST00000542727 ECM29Q5VYK3 1845 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 SCAF11Q99590 1463 aaKnown RBP0.5□□□□□ -2.33
KNTC1-213ENST00000542727 TEX50A0A1B0GTY4 177 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 TINCRA0A1B0GVN0 87 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 F8W036 122 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 TFPTP0C1Z6 253 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 CD40LGP29965 261 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 HIST1H4AP62805 103 aaKnown RBP0.5□□□□□ -2.33
KNTC1-213ENST00000542727 AKR1C1Q04828 323 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 EBPQ15125 230 aaKnown RBP0.5□□□□□ -2.33
KNTC1-213ENST00000542727 UBL4BQ8N7F7 174 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 OR5L1Q8NGL2 311 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 OR2T27Q8NH04 317 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 DNAJB3Q8WWF6 145 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 ASB13Q8WXK3 278 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 ACOT12Q8WYK0 555 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 OR52A5Q9H2C5 316 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 HRASLSQ9HDD0 168 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 TP53TG1Q9Y2A0 90 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 C22orf24Q9Y442 160 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 SCN3AQ9NY46 2000 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 FBN2P35556 2912 aa0.5□□□□□ -2.33
KNTC1-213ENST00000542727 AHNAKQ09666 5890 aaKnown RBP0.49□□□□□ -2.33
KNTC1-213ENST00000542727 SMARCA4P51532 1647 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 SETD5Q9C0A6 1442 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 IGKV1-9A0A0C4DH69 117 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 MEIS3P1A6NDR6 274 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 IQCF5A8MTL0 148 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 HSBP1L1C9JCN9 74 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 TRAPPC2LH3BP13 241 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 MRPS14O60783 128 aaKnown RBP0.49□□□□□ -2.33
KNTC1-213ENST00000542727 HIST1H1CP16403 213 aaKnown RBP0.49□□□□□ -2.33
KNTC1-213ENST00000542727 UGT2B7P16662 529 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 MSNP26038 577 aaKnown RBP0.49□□□□□ -2.33
KNTC1-213ENST00000542727 REG1BP48304 166 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 CXCR4P61073 352 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 RPS24P62847 133 aaKnown RBP0.49□□□□□ -2.33
KNTC1-213ENST00000542727 Q1T7F1 81 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 LRRC26Q2I0M4 334 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 PLPPR5Q32ZL2 321 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 DNM1P34Q6PK57 102 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 CD302Q8IX05 232 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 Q8N2B8 174 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 TBC1D19Q8N5T2 526 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 ZNF676Q8N7Q3 588 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 GNPNAT1Q96EK6 184 aaPredicted RBP0.49□□□□□ -2.33
KNTC1-213ENST00000542727 ODF3Q96PU9 254 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 CCL13Q99616 98 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 DHRS9Q9BPW9 319 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 C7orf50Q9BRJ6 194 aaKnown RBP0.49□□□□□ -2.33
KNTC1-213ENST00000542727 REG4Q9BYZ8 158 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 UPF3BQ9BZI7 483 aaKnown RBP0.49□□□□□ -2.33
KNTC1-213ENST00000542727 SLC22A4Q9H015 551 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 CHMP4BQ9H444 224 aaKnown RBP0.49□□□□□ -2.33
KNTC1-213ENST00000542727 MED9Q9NWA0 146 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 TIMM22Q9Y584 194 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 CACNA1BQ00975 2339 aa0.49□□□□□ -2.33
KNTC1-213ENST00000542727 PLXND1Q9Y4D7 1925 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 KIF24Q5T7B8 1368 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 LAMA4Q16363 1823 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 TRAPPC13A5PLN9 417 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 OR51F1A6NGY5 319 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 GOLGA6L10A6NI86 522 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 I3L521 148 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 BIRC5O15392 142 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 PLA2G10O15496 165 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 HCRTO43612 131 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 HPGDSO60760 199 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 APOMO95445 188 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 NSA2O95478 260 aaKnown RBP0.48□□□□□ -2.33
KNTC1-213ENST00000542727 MSMBP08118 114 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 UBBP0CG47 229 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 EIF2B2P49770 351 aaKnown RBP0.48□□□□□ -2.33
KNTC1-213ENST00000542727 RAB13P51153 203 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 FKBP1AP62942 108 aaKnown RBP0.48□□□□□ -2.33
KNTC1-213ENST00000542727 CTAG1AP78358 180 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 PPP1R1AQ13522 171 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 ACSM3Q53FZ2 586 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 SDHAF4Q5VUM1 108 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 SBSNQ6UWP8 590 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 SSX8Q7RTT4 187 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 FAM19A5Q7Z5A7 132 aaPredicted RBP0.48□□□□□ -2.33
KNTC1-213ENST00000542727 SLC51BQ86UW2 128 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 DYNAPQ8N1N2 210 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 UMODL1-AS1Q8N2C9 162 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 SLC22A24Q8N4F4 322 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 HAVCR2Q8TDQ0 301 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 PACRGQ96M98 296 aaPredicted RBP0.48□□□□□ -2.33
KNTC1-213ENST00000542727 ERMAPQ96PL5 475 aaPredicted RBP0.48□□□□□ -2.33
KNTC1-213ENST00000542727 CHST6Q9GZX3 395 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 SPACA1Q9HBV2 294 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 HES4Q9HCC6 221 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 EURLQ9NYK6 297 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 ANAPC10Q9UM13 185 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 PRELID1Q9Y255 219 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 COQ4Q9Y3A0 265 aa0.48□□□□□ -2.33
KNTC1-213ENST00000542727 CASP8AP2Q9UKL3 1982 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms