RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 GNB3P16520 340 aa13.19□□□□□ -0.3
CLSTN3-214ENST00000542663 MAP2K4P45985 399 aa13.19□□□□□ -0.3
CLSTN3-214ENST00000542663 RPL27AP46776 148 aaKnown RBP13.19□□□□□ -0.3
CLSTN3-214ENST00000542663 OR2B11Q5JQS5 317 aa13.19□□□□□ -0.3
CLSTN3-214ENST00000542663 KCTD9Q7L273 389 aa13.19□□□□□ -0.3
CLSTN3-214ENST00000542663 PUSL1Q8N0Z8 303 aaKnown RBP13.19□□□□□ -0.3
CLSTN3-214ENST00000542663 OR2C3Q8N628 320 aa13.19□□□□□ -0.3
CLSTN3-214ENST00000542663 PACRGLQ8N7B6 248 aa13.19□□□□□ -0.3
CLSTN3-214ENST00000542663 PHLDA1Q8WV24 401 aaPredicted RBP13.19□□□□□ -0.3
CLSTN3-214ENST00000542663 DCUN1D5Q9BTE7 237 aa13.19□□□□□ -0.3
CLSTN3-214ENST00000542663 UBQLN2Q9UHD9 624 aa13.19□□□□□ -0.3
CLSTN3-214ENST00000542663 DPPA5A6NC42 116 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 MFSD2BA6NFX1 497 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 J3QRK9 145 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 UBE2CO00762 179 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 CTRB1P17538 263 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 PSMB6P28072 239 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 BRWD1-AS2P59051 145 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 RPS25P62851 125 aaKnown RBP13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 MED22Q15528 200 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 ZNF585BQ52M93 769 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 CTRB2Q6GPI1 263 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 RBPMS2Q6ZRY4 209 aaKnown RBP13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 Q6ZS49 121 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 ZNF645Q8N7E2 425 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 OR10R2Q8NGX6 335 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 TMEM167AQ8TBQ9 72 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 EEF1AKMT3Q96AZ1 226 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 RAB22AQ9UL26 194 aa13.18□□□□□ -0.3
CLSTN3-214ENST00000542663 IGLV11-55A0A075B6I3 123 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 A0A075B6Q4 140 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 RAB27BO00194 218 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 S1PR2O95136 353 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 CLEC3BP05452 202 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 MYOD1P15172 320 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 ARFRP1Q13795 201 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 ODF3L2Q3SX64 289 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 HES5Q5TA89 166 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 MARC2Q969Z3 335 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 OR2A7Q96R45 310 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 MRPL27Q9P0M9 148 aaKnown RBP13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 RYR1P21817 5038 aa13.17□□□□□ -0.3
CLSTN3-214ENST00000542663 KIR2DL5BA0A0G2JN68 375 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 KIR2DL5BA0A0G2JPC4 375 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 CGB1A6NKQ9 187 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 REG1AP05451 166 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 HIST1H1DP16402 221 aaKnown RBP13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 GALP22466 123 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 MAS1LP35410 378 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 PRR20EP86478 221 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 PRR20CP86479 221 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 PRR20DP86480 221 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 PRR20BP86481 221 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 PRR20AP86496 221 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 IRF3Q14653 427 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 KIR2DL5AQ8N109 375 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 KIR2DL5BQ8NHK3 375 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 GATAD1Q8WUU5 269 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 UFD1Q92890 307 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 SPAG8Q99932 426 aaPredicted RBP13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 C5orf66Q9H5L9 145 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 C8orf4Q9NR00 106 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 ELF5Q9UKW6 265 aaPredicted RBP13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 MRPS7Q9Y2R9 242 aaKnown RBP13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 RBMX2Q9Y388 322 aaKnown RBP13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 PRELID3BQ9Y3B1 194 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 V9GY05 133 aa13.16□□□□□ -0.3
CLSTN3-214ENST00000542663 TRBV7-1A0A0A6YYK4 115 aa13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 IGKV1D-13A0A0B4J2D9 117 aa13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 IGHV3-35A0A0C4DH35 117 aa13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 PTGES3LE9PB15 166 aa13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 ARL6IP5O75915 188 aa13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 HLA-DQB1P01920 261 aa13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 IGKV1-13P0DP09 117 aa13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 HIST1H1BP16401 226 aaKnown RBP13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 CALRP27797 417 aaKnown RBP13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 ELLP55199 621 aaPredicted RBP13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 EIF4EBP1Q13541 118 aaPredicted RBP13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 SLC38A6Q8IZM9 456 aa13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 STPG3Q8N7X2 389 aa13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 VSTM2AQ8TAG5 236 aa13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 OR2W1Q9Y3N9 320 aa13.15□□□□□ -0.3
CLSTN3-214ENST00000542663 TSPAN4O14817 238 aa13.14□□□□□ -0.31
CLSTN3-214ENST00000542663 DHFRP00374 187 aa13.14□□□□□ -0.31
CLSTN3-214ENST00000542663 NFYAP23511 347 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-214ENST00000542663 GADD45AP24522 165 aa13.14□□□□□ -0.31
CLSTN3-214ENST00000542663 FCGR2BP31994 310 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-214ENST00000542663 GPR183P32249 361 aa13.14□□□□□ -0.31
CLSTN3-214ENST00000542663 TMEM217Q8N7C4 229 aa13.14□□□□□ -0.31
CLSTN3-214ENST00000542663 ZNF502Q8TBZ5 544 aa13.14□□□□□ -0.31
CLSTN3-214ENST00000542663 ZNF436Q9C0F3 470 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-214ENST00000542663 FAT2Q9NYQ8 4349 aa13.14□□□□□ -0.31
CLSTN3-214ENST00000542663 CD36P16671 472 aa13.13□□□□□ -0.31
CLSTN3-214ENST00000542663 RPL35AP18077 110 aaKnown RBP13.13□□□□□ -0.31
CLSTN3-214ENST00000542663 FABP5Q01469 135 aa13.13□□□□□ -0.31
CLSTN3-214ENST00000542663 OR4S2Q8NH73 311 aa13.13□□□□□ -0.31
CLSTN3-214ENST00000542663 CXorf58Q96LI9 332 aa13.13□□□□□ -0.31
CLSTN3-214ENST00000542663 CENPOQ9BU64 300 aa13.13□□□□□ -0.31
CLSTN3-214ENST00000542663 MAP6D1Q9H9H5 199 aa13.13□□□□□ -0.31
CLSTN3-214ENST00000542663 UFC1Q9Y3C8 167 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms