RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 POLR3KQ9Y2Y1 108 aaPredicted RBP5.41□□□□□ -1.54
PTPRO-208ENST00000542557 TGIF2-C20orf24A0A0A6YYL0 155 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 PCP4L1A6NKN8 68 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 C15orf61A6NNL5 157 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 ATXN7O15265 892 aaPredicted RBP5.4□□□□□ -1.54
PTPRO-208ENST00000542557 GFRA3O60609 400 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 HOXA5P20719 270 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 CD40P25942 277 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 TNFAIP6P98066 277 aaPredicted RBP5.4□□□□□ -1.54
PTPRO-208ENST00000542557 TCF15Q12870 199 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 SPINK9Q5DT21 86 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 TEX36Q5VZQ5 186 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 FAM180AQ6UWF9 173 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 ZNF439Q8NDP4 499 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 CORO2AQ92828 525 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 GAFA1Q96PS6 74 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 KCNIP2Q9NS61 270 aa5.4□□□□□ -1.54
PTPRO-208ENST00000542557 EP300Q09472 2414 aaPredicted RBP5.4□□□□□ -1.55
PTPRO-208ENST00000542557 DSCAML1Q8TD84 2053 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 ZNF729A6NN14 1252 aaPredicted RBP5.4□□□□□ -1.55
PTPRO-208ENST00000542557 SLC31A2O15432 143 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 BMI1P35226 326 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 OPRK1P41145 380 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 TLE1Q04724 770 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 TMEM241Q24JQ0 296 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 CT45A1Q5HYN5 189 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 PET117Q6UWS5 81 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 ZNF788Q6ZQV5 615 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 TCF23Q7RTU1 214 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 CT45A3Q8NHU0 189 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 FAM210BQ96KR6 192 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 TMPRSS5Q9H3S3 457 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 TCF19Q9Y242 345 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 FOXA2Q9Y261 457 aaPredicted RBP5.4□□□□□ -1.55
PTPRO-208ENST00000542557 URGCP-MRPS24S4R325 110 aa5.4□□□□□ -1.55
PTPRO-208ENST00000542557 TANC2Q9HCD6 1990 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 CACNA1DQ01668 2161 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 CFAP47Q6ZTR5 3102 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 SAA2-SAA4A0A096LPE2 208 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 A4D1N5 150 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 HSBP1L1C9JCN9 74 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 VENTXO95231 258 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 IFNA10P01566 189 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 SAA2P0DJI9 122 aaPredicted RBP5.39□□□□□ -1.55
PTPRO-208ENST00000542557 CCKARP32238 428 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 CDX1P47902 265 aaPredicted RBP5.39□□□□□ -1.55
PTPRO-208ENST00000542557 SSTP61278 116 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 SSX9Q7RTT3 188 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 SSX8Q7RTT4 187 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 NEIL1Q96FI4 390 aaPredicted RBP5.39□□□□□ -1.55
PTPRO-208ENST00000542557 PARLQ9H300 379 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 HEYLQ9NQ87 328 aaPredicted RBP5.39□□□□□ -1.55
PTPRO-208ENST00000542557 TMEM14BQ9NUH8 114 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 IDI2-AS1Q9NZ38 188 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 DIDO1Q9BTC0 2240 aaKnown RBP5.39□□□□□ -1.55
PTPRO-208ENST00000542557 FNDC10F2Z333 226 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 CLN5O75503 358 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 SELLP14151 372 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 RPS16P62249 146 aaKnown RBP5.39□□□□□ -1.55
PTPRO-208ENST00000542557 RPL23P62829 140 aaKnown RBP5.39□□□□□ -1.55
PTPRO-208ENST00000542557 FAM27E3Q08E93 113 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 BSXQ3C1V8 233 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 TMEM108Q6UXF1 575 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 TREML4Q6UXN2 200 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 C1orf229Q6ZS94 237 aaPredicted RBP5.39□□□□□ -1.55
PTPRO-208ENST00000542557 OR10A7Q8NGE5 316 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 PLPPR2Q96GM1 343 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 TXNDC17Q9BRA2 123 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 PYGO2Q9BRQ0 406 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 ELOVL5Q9NYP7 299 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 HCFC1P51610 2035 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 ASPMQ8IZT6 3477 aa5.39□□□□□ -1.55
PTPRO-208ENST00000542557 K7EM74 188 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 RRHO14718 337 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 EREGO14944 169 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HMGB3O15347 200 aaKnown RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 KLK10O43240 276 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 PDE6DO43924 150 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HIST1H2BKO60814 126 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HIST1H2BJP06899 126 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 IRF2P14316 349 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HIST1H2BOP23527 126 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HIST1H2BBP33778 126 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 TDGF1P3P51864 188 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HIST1H2BDP58876 126 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HSPE1P61604 102 aaKnown RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HIST1H2BCP62807 126 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 MRPS11P82912 194 aaKnown RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HNF4GQ14541 408 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 ADIRFQ15847 76 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HIST2H2BEQ16778 126 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 FAM201AQ5SY85 155 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 PRSS33Q8NF86 280 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 OR4F5Q8NH21 305 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 TMEM170AQ8WVE7 144 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HIST1H2BHQ93079 126 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 RPUSD4Q96CM3 377 aaKnown RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 OR4F4Q96R69 305 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HIST1H2BNQ99877 126 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms