RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 NPIPB5A8MRT5 1133 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 RGS10O43665 173 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 ACTL6BO94805 426 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 KBTBD11O94819 623 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 ZNF735P0CB33 412 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 ARL3P36405 182 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 ARFRP1Q13795 201 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 TRAM1Q15629 374 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 TM4SF20Q53R12 229 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 GPHB5Q86YW7 130 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 PUSL1Q8N0Z8 303 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 UXS1Q8NBZ7 420 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 NUDCD2Q8WVJ2 157 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 CCDC90BQ9GZT6 254 aa11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 TECRQ9NZ01 308 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-213ENST00000541953 A0A0J9YWU9 116 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 A8MWP6 167 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 LY6G6CO95867 125 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 HLA-DQB1P01920 261 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 GADD45AP24522 165 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 PSMA1P25786 263 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 RPL27AP46776 148 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 ZNF57Q68EA5 555 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 SSX9Q7RTT3 188 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 OR52B4Q8NGK2 314 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 TMEM167AQ8TBQ9 72 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 GGTLC1Q9BX51 225 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 OR51E2Q9H255 320 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 SPATA2Q9UM82 520 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 OR2W1Q9Y3N9 320 aa11.52□□□□□ -0.57
CLSTN3-213ENST00000541953 IGHV3-35A0A0C4DH35 117 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 ZNF320A2RRD8 509 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 SSX5O60225 188 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 CRYGCP07315 174 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 PTHLHP12272 177 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 CTRB1P17538 263 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 RAB6AP20340 208 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 CRHBPP24387 322 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 PSMB6P28072 239 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 CTRB2Q6GPI1 263 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 OR2A7Q96R45 310 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 ST6GALNAC5Q9BVH7 336 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 SLC2A9Q9NRM0 540 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 TAS2R8Q9NYW2 309 aa11.51□□□□□ -0.57
CLSTN3-213ENST00000541953 FAT2Q9NYQ8 4349 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 IGLV11-55A0A075B6I3 123 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 LOC102724200A0A096LPH7 203 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 TRAV1-2A0A0B4J238 106 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 TMEM235A6NFC5 223 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 S1PR2O95136 353 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 DTYMKP23919 212 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 TALDO1P37837 337 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 KLK9Q2XQG4 91 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 CDNFQ49AH0 187 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 SLC16A13Q7RTY0 426 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 PRSS48Q7RTY5 328 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 RPP25LQ8N5L8 163 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 TCTEX1D2Q8WW35 142 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 ATG5Q9H1Y0 275 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 ACOT13Q9NPJ3 140 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 UBQLN2Q9UHD9 624 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 KLK9Q9UKQ9 250 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 TPRKBQ9Y3C4 175 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 DNAH2Q9P225 4427 aa11.5□□□□□ -0.57
CLSTN3-213ENST00000541953 TRAV3A0A0B4J244 114 aa11.49□□□□□ -0.57
CLSTN3-213ENST00000541953 TNFSF12O43508 249 aa11.49□□□□□ -0.57
CLSTN3-213ENST00000541953 CREBL2O60519 120 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-213ENST00000541953 DEFB135Q30KP9 77 aa11.49□□□□□ -0.57
CLSTN3-213ENST00000541953 FAM209BQ5JX69 171 aa11.49□□□□□ -0.57
CLSTN3-213ENST00000541953 ZNF773Q6PK81 442 aa11.49□□□□□ -0.57
CLSTN3-213ENST00000541953 SLC25A42Q86VD7 318 aa11.49□□□□□ -0.57
CLSTN3-213ENST00000541953 OR4S2Q8NH73 311 aa11.49□□□□□ -0.57
CLSTN3-213ENST00000541953 MRPS7Q9Y2R9 242 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-213ENST00000541953 KIAA1109Q2LD37 5005 aa11.49□□□□□ -0.57
CLSTN3-213ENST00000541953 PCLOQ9Y6V0 5065 aa11.49□□□□□ -0.57
CLSTN3-213ENST00000541953 DPPA5A6NC42 116 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 C8orf88P0DMB2 117 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 CD36P16671 472 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 RAB3BP20337 219 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 GPR183P32249 361 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 PSMD7P51665 324 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 HACD4Q5VWC8 232 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 C22orf42Q6IC83 251 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 OR4A47Q6IF82 309 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 LYG2Q86SG7 212 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 MFSD4AQ8N468 514 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 EEF1AKMT3Q96AZ1 226 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 NDUFB11Q9NX14 153 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 PRELID3BQ9Y3B1 194 aa11.48□□□□□ -0.57
CLSTN3-213ENST00000541953 IGLC7A0M8Q6 106 aa11.47□□□□□ -0.57
CLSTN3-213ENST00000541953 DEDDO75618 318 aa11.47□□□□□ -0.57
CLSTN3-213ENST00000541953 CLEC3BP05452 202 aa11.47□□□□□ -0.57
CLSTN3-213ENST00000541953 OR2B8PP59922 312 aa11.47□□□□□ -0.57
CLSTN3-213ENST00000541953 TBCEQ15813 527 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-213ENST00000541953 ODF3L2Q3SX64 289 aa11.47□□□□□ -0.57
CLSTN3-213ENST00000541953 TIMM50Q3ZCQ8 353 aa11.47□□□□□ -0.57
CLSTN3-213ENST00000541953 ZNF585BQ52M93 769 aa11.47□□□□□ -0.57
CLSTN3-213ENST00000541953 ZNF502Q8TBZ5 544 aa11.47□□□□□ -0.57
CLSTN3-213ENST00000541953 ZNF414Q96IQ9 312 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms