RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 AQP7O14520 342 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 HS3ST1O14792 307 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 NXPH2O95156 264 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 CXorf1O96002 111 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 PSG2P11465 335 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 HOXB4P17483 251 aaPredicted RBP8.72□□□□□ -1.01
CHFR-219ENST00000541341 CD1BP29016 333 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 TMEM267Q0VDI3 215 aaPredicted RBP8.72□□□□□ -1.01
CHFR-219ENST00000541341 WIPI1Q5MNZ9 446 aaPredicted RBP8.72□□□□□ -1.01
CHFR-219ENST00000541341 FFAR4Q5NUL3 377 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 PHYHD1Q5SRE7 291 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 BRICD5Q6PL45 260 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 TMEM144Q7Z5S9 345 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 YRDCQ86U90 279 aaKnown RBP8.72□□□□□ -1.01
CHFR-219ENST00000541341 OR5AU1Q8NGC0 362 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 SDSLQ96GA7 329 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 VAMP8Q9BV40 100 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 RTL8AQ9BWD3 113 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 TUBG2Q9NRH3 451 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 ZNF586Q9NXT0 402 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 SPG11Q96JI7 2443 aa8.72□□□□□ -1.01
CHFR-219ENST00000541341 MED12LQ86YW9 2145 aa8.71□□□□□ -1.01
CHFR-219ENST00000541341 IGKV3D-15A0A087WSY6 115 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 TRGV5A0A0B4J1U4 118 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 UBE2L5PA0A1B0GUS4 154 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 C9JCJ5 164 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 J3QT63 122 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 SH2D1BO14796 132 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 MRPL33O75394 65 aaKnown RBP8.71□□□□□ -1.02
CHFR-219ENST00000541341 TRAPPC6AO75865 159 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 HPRT1P00492 218 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 SELEP16581 610 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 ZNF25P17030 456 aaPredicted RBP8.71□□□□□ -1.02
CHFR-219ENST00000541341 BCL3P20749 454 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 LHX2P50458 406 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 ERVS71-1P61550 626 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 ZNF726P1Q15940 193 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 CEACAM16Q2WEN9 425 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 OR10J3Q5JRS4 329 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 TEX43Q6ZNM6 134 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 GGNQ86UU5 652 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 RPP25LQ8N5L8 163 aaKnown RBP8.71□□□□□ -1.02
CHFR-219ENST00000541341 ZNF645Q8N7E2 425 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 NINJ1Q92982 152 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 RNF2Q99496 336 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 HSD17B10Q99714 261 aaKnown RBP8.71□□□□□ -1.02
CHFR-219ENST00000541341 SMR3AQ99954 134 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 CHRDL1Q9BU40 450 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 TMUB1Q9BVT8 246 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 C19orf24Q9BVV8 132 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 SPRR3Q9UBC9 169 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 WIPI2Q9Y4P8 454 aa8.71□□□□□ -1.02
CHFR-219ENST00000541341 IGKV1D-13A0A0B4J2D9 117 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 A0A0J9YW62 118 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 LRRC30A6NM36 301 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 ZNF716A6NP11 495 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 FNDC10F2Z333 226 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 SLC33A1O00400 549 aaPredicted RBP8.7□□□□□ -1.02
CHFR-219ENST00000541341 MMP7P09237 267 aaPredicted RBP8.7□□□□□ -1.02
CHFR-219ENST00000541341 IGKV1-13P0DP09 117 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 CRISP2P16562 243 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 OPRK1P41145 380 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 CLDN18P56856 261 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 RPL15P61313 204 aaKnown RBP8.7□□□□□ -1.02
CHFR-219ENST00000541341 MZT1Q08AG7 82 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 PMCHL1Q16048 86 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 C1orf185Q5T7R7 199 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 RASL11AQ6T310 242 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 ZNF705AQ6ZN79 300 aaPredicted RBP8.7□□□□□ -1.02
CHFR-219ENST00000541341 C19orf35Q6ZS72 473 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 LINC01551Q86U37 167 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 CALHM1Q8IU99 346 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 FGFRL1Q8N441 504 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 OR10G8Q8NGN5 311 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 OR5B3Q8NH48 314 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 OR52E5Q8NH55 327 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 TMEM190Q8WZ59 177 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 SFRP2Q96HF1 295 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 SNHG12Q9BXW3 62 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 GNB1LQ9BYB4 327 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 CRIM1Q9NZV1 1036 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 TRAPPC2LQ9UL33 140 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 ZFP30Q9Y2G7 519 aa8.7□□□□□ -1.02
CHFR-219ENST00000541341 DNHD1Q96M86 4753 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 SAA2-SAA4A0A096LPE2 208 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 OR5G3P0C626 314 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 B4GALT1P15291 398 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 AREGP15514 252 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 BMP5P22003 454 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 IL3RAP26951 378 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 BRS3P32247 399 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 KIR2DS2P43631 304 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 FGF8P55075 233 aaPredicted RBP8.69□□□□□ -1.02
CHFR-219ENST00000541341 ELLP55199 621 aaPredicted RBP8.69□□□□□ -1.02
CHFR-219ENST00000541341 TGFBR3Q03167 851 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 GABRA6Q16445 453 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 FAM78BQ5VT40 261 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 DMRTA1Q5VZB9 504 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 CDPF1Q6NVV7 123 aa8.69□□□□□ -1.02
CHFR-219ENST00000541341 H2BFWTQ7Z2G1 175 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms