RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 KLK11Q9UBX7 282 aa10.16□□□□□ -0.78
LTBR-208ENST00000541005 PRKDCP78527 4128 aaKnown RBP10.16□□□□□ -0.78
LTBR-208ENST00000541005 MSGN1A6NI15 193 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 CTDSPLO15194 276 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 PGLYRP1O75594 196 aaPredicted RBP10.15□□□□□ -0.78
LTBR-208ENST00000541005 ACTL6BO94805 426 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 HPRT1P00492 218 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 CD74P04233 296 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 NQO2P16083 231 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 TPPP2P59282 170 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 TSPAN5P62079 268 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 ZNF616Q08AN1 781 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 EGFEM1PQ0D2K5 195 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 AADACL3Q5VUY0 350 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 FOXB2Q5VYV0 432 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 OR4A47Q6IF82 309 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 LPCAT3Q6P1A2 487 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 LHFPL1Q86WI0 220 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 CADM3Q8N126 398 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 ARRDC1Q8N5I2 433 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 ADAD2Q8NCV1 583 aaKnown RBP10.15□□□□□ -0.78
LTBR-208ENST00000541005 OR11H1Q8NG94 326 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 CASTOR1Q8WTX7 329 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 SMIM4Q8WVI0 70 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 FCAMRQ8WWV6 532 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 SPIN2AQ99865 258 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 SPIN2BQ9BPZ2 258 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 RSRP1Q9BUV0 290 aa10.15□□□□□ -0.78
LTBR-208ENST00000541005 FAM212BQ9NTI7 297 aaPredicted RBP10.15□□□□□ -0.78
LTBR-208ENST00000541005 TGP01266 2768 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 ZNF701M0R085 212 aaPredicted RBP10.14□□□□□ -0.79
LTBR-208ENST00000541005 TRGV3P03979 118 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 RLN1P04808 185 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 IL6RP08887 468 aaPredicted RBP10.14□□□□□ -0.79
LTBR-208ENST00000541005 OR9G9P0C7N8 305 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 F2RP25116 425 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 RPL8P62917 257 aaKnown RBP10.14□□□□□ -0.79
LTBR-208ENST00000541005 DGCR2P98153 550 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 RNASE12Q5GAN4 147 aaKnown RBP10.14□□□□□ -0.79
LTBR-208ENST00000541005 RNASE10Q5GAN6 216 aaKnown RBP10.14□□□□□ -0.79
LTBR-208ENST00000541005 C10orf55Q5SWW7 151 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 SLC38A6Q8IZM9 456 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 TMEM229BQ8NBD8 167 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 OR5T1Q8NG75 326 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 OR1N2Q8NGR9 330 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 DGCR14Q96DF8 476 aaKnown RBP10.14□□□□□ -0.79
LTBR-208ENST00000541005 DIRAS2Q96HU8 199 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 PHB2Q99623 299 aa10.14□□□□□ -0.79
LTBR-208ENST00000541005 TINAGL1Q9GZM7 467 aaPredicted RBP10.14□□□□□ -0.79
LTBR-208ENST00000541005 DNAH3Q8TD57 4116 aa10.13□□□□□ -0.79
LTBR-208ENST00000541005 TEX22C9J3V5 150 aa10.13□□□□□ -0.79
LTBR-208ENST00000541005 M0QYG6 137 aa10.13□□□□□ -0.79
LTBR-208ENST00000541005 S1PR2O95136 353 aa10.13□□□□□ -0.79
LTBR-208ENST00000541005 CD3DP04234 171 aa10.13□□□□□ -0.79
LTBR-208ENST00000541005 ZNF735P0CB33 412 aa10.13□□□□□ -0.79
LTBR-208ENST00000541005 TAS2R19P59542 299 aa10.13□□□□□ -0.79
LTBR-208ENST00000541005 TTC9CQ8N5M4 171 aa10.13□□□□□ -0.79
LTBR-208ENST00000541005 MS4A10Q96PG2 267 aa10.13□□□□□ -0.79
LTBR-208ENST00000541005 OR5B12Q96R08 314 aa10.13□□□□□ -0.79
LTBR-208ENST00000541005 C6orf62Q9GZU0 229 aaPredicted RBP10.13□□□□□ -0.79
LTBR-208ENST00000541005 A0A0G2JLM5 398 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 A0A1B0GW64 132 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 NPIPB5A8MRT5 1133 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 GSTZ1O43708 216 aaPredicted RBP10.12□□□□□ -0.79
LTBR-208ENST00000541005 IFNA6P05013 189 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 HLA-GP17693 338 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 S100GP29377 79 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 RPL27AP46776 148 aaKnown RBP10.12□□□□□ -0.79
LTBR-208ENST00000541005 RAB25P57735 213 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 RND3P61587 244 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 ZNF585BQ52M93 769 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 PHLDA2Q53GA4 152 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 SSX9Q7RTT3 188 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 SLC25A42Q86VD7 318 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 MCFD2Q8NI22 146 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 DPF1Q92782 380 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 ZNF486Q96H40 463 aaPredicted RBP10.12□□□□□ -0.79
LTBR-208ENST00000541005 USMG5Q96IX5 58 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 SOSTQ9BQB4 213 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 ALX4Q9H161 411 aaPredicted RBP10.12□□□□□ -0.79
LTBR-208ENST00000541005 SLC2A9Q9NRM0 540 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 ZNF355PQ9NSJ1 428 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 TMEM140Q9NV12 185 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 AURKAIP1Q9NWT8 199 aaPredicted RBP10.12□□□□□ -0.79
LTBR-208ENST00000541005 COA4Q9NYJ1 87 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 ZNF257Q9Y2Q1 563 aa10.12□□□□□ -0.79
LTBR-208ENST00000541005 IGHV4OR15-8A0A075B7B6 117 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 A0A087WW49 117 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 TRBV9A0A0B4J1U6 114 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 C13orf42A0A1B0GVH6 325 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 FAM223BA6NKX1 122 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 MARCH11A6NNE9 402 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 E7EUB6 86 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 LINC01619G3V211 115 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 UPK2O00526 184 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 MPPED1O15442 326 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 IGHV3-11P01762 117 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 HSPB1P04792 205 aaKnown RBP10.11□□□□□ -0.79
LTBR-208ENST00000541005 APELAP0DMC3 54 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 PTBP1P26599 531 aaKnown RBP eCLIP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms