RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 LIPFP07098 398 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 FGF2P09038 288 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 NFYBP25208 207 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 DUTP33316 252 aaKnown RBP6.81□□□□□ -1.32
CHD4-208ENST00000540960 RAB2AP61019 212 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 SCGB2A2Q13296 93 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 EIF4EBP1Q13541 118 aaPredicted RBP6.81□□□□□ -1.32
CHD4-208ENST00000540960 C17orf58Q2M2W7 97 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 SLC25A48Q6ZT89 311 aaKnown RBP6.81□□□□□ -1.32
CHD4-208ENST00000540960 REC114Q7Z4M0 266 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 COMMD1Q8N668 190 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 FAM216BQ8N7L0 139 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 OR1S2Q8NGQ3 325 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 OR4A16Q8NH70 328 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 OR9G1Q8NH87 305 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 LHFPL5Q8TAF8 219 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 VSTM2AQ8TAG5 236 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 H1FXQ92522 213 aaKnown RBP6.81□□□□□ -1.32
CHD4-208ENST00000540960 GPR146Q96CH1 333 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 PRR13Q9NZ81 148 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 CACNG5Q9UF02 275 aa6.81□□□□□ -1.32
CHD4-208ENST00000540960 RCL1Q9Y2P8 373 aaKnown RBP6.81□□□□□ -1.32
CHD4-208ENST00000540960 STRAPQ9Y3F4 350 aaKnown RBP6.81□□□□□ -1.32
CHD4-208ENST00000540960 WNK2Q9Y3S1 2297 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 CHST1O43916 411 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 SSSCA1O60232 199 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 PRTN3P24158 256 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 SULT1A1P50225 295 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 ERVFRD-1P60508 538 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 SPCS3P61009 180 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 TNFRSF9Q07011 255 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 POU2AF1Q16633 256 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 AARDQ4LEZ3 155 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 ZNF585BQ52M93 769 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 SAMD5Q5TGI4 173 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 TMEM200BQ69YZ2 307 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 UQCC3Q6UW78 93 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 DPPA3Q6W0C5 159 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 C1orf122Q6ZSJ8 110 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 PUSL1Q8N0Z8 303 aaKnown RBP6.8□□□□□ -1.32
CHD4-208ENST00000540960 LYG1Q8N1E2 194 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 STPG2Q8N412 459 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 EIF4E3Q8N5X7 224 aaKnown RBP6.8□□□□□ -1.32
CHD4-208ENST00000540960 TMEM252Q8N6L7 170 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 KIR3DL3Q8N743 410 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 TPRX1Q8N7U7 411 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 SIGLECL1Q8N7X8 197 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 DMBX1Q8NFW5 382 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 OR10X1Q8NGY0 326 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 OR4A5Q8NH83 315 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 C8orf46Q8TAG6 207 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 OSR1Q8TAX0 266 aaPredicted RBP6.8□□□□□ -1.32
CHD4-208ENST00000540960 ZNF596Q8TC21 504 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 SCGB1C1Q8TD33 95 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 PINX1Q96BK5 328 aaKnown RBP6.8□□□□□ -1.32
CHD4-208ENST00000540960 R3HDM4Q96D70 268 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 HIPK2Q9H2X6 1198 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 IFI27L2Q9H2X8 130 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 ENY2Q9NPA8 101 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 HSPB7Q9UBY9 170 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 PRNDQ9UKY0 176 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 AUP1Q9Y679 476 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 DNAH9Q9NYC9 4486 aa6.8□□□□□ -1.32
CHD4-208ENST00000540960 RAB19A4D1S5 217 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 BTBD17A6NE02 478 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 DNAJC9-AS1A6NH13 148 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 MARCH11A6NNE9 402 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 C17orf98A8MV24 154 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 KRBOX1C9JBD0 128 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 PPIHO43447 177 aaKnown RBP6.79□□□□□ -1.32
CHD4-208ENST00000540960 FCGR3BO75015 233 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 KRASP01116 189 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 IGHV2-70P01814 119 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 CEACAM3P40198 252 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 ZNF137PP52743 207 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 UBE2KP61086 200 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 POLR2GP62487 172 aaKnown RBP eCLIP6.79□□□□□ -1.32
CHD4-208ENST00000540960 EWSR1Q01844 656 aaKnown RBP eCLIP6.79□□□□□ -1.32
CHD4-208ENST00000540960 LTC4SQ16873 150 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 SPRNQ5BIV9 151 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 CT45A1Q5HYN5 189 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 CXorf66Q5JRM2 361 aaPredicted RBP6.79□□□□□ -1.32
CHD4-208ENST00000540960 FAM201AQ5SY85 155 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 PRAMEF5Q5TYX0 476 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 SLC25A24Q6NUK1 477 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 ALKAL2Q6UX46 152 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 IL34Q6ZMJ4 242 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 HSD17B13Q7Z5P4 300 aaPredicted RBP6.79□□□□□ -1.32
CHD4-208ENST00000540960 ZNF429Q86V71 674 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 ZNF439Q8NDP4 499 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 LFNGQ8NES3 379 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 CT45A3Q8NHU0 189 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 CYYR1Q96J86 154 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 GINS3Q9BRX5 216 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 DCTN5Q9BTE1 182 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 GGACTQ9BVM4 153 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 PARD6GQ9BYG4 376 aaPredicted RBP6.79□□□□□ -1.32
CHD4-208ENST00000540960 ARV1Q9H2C2 271 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 KCNIP2Q9NS61 270 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 AURKAIP1Q9NWT8 199 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms