RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 DNAH3Q8TD57 4116 aa13.08□□□□□ -0.32
CD9-209ENST00000540891 A0A1B0GW64 132 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 E7EUB6 86 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 H3BUA1 57 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 CREBL2O60519 120 aaPredicted RBP13.07□□□□□ -0.32
CD9-209ENST00000540891 S1PR2O95136 353 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 BRI3O95415 125 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 DUS4LO95620 317 aaKnown RBP13.07□□□□□ -0.32
CD9-209ENST00000540891 HPRT1P00492 218 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 TRGV3P03979 118 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 CD74P04233 296 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 IL6RP08887 468 aaPredicted RBP13.07□□□□□ -0.32
CD9-209ENST00000540891 LGALS1P09382 135 aaKnown RBP13.07□□□□□ -0.32
CD9-209ENST00000540891 UCP3P55916 312 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 RAB25P57735 213 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 TAS2R31P59538 309 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 POU2AF1Q16633 256 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 OR4A47Q6IF82 309 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 TMEM229BQ8NBD8 167 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 ADAD2Q8NCV1 583 aaKnown RBP13.07□□□□□ -0.32
CD9-209ENST00000540891 OR4D10Q8NGI6 311 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 SMIM4Q8WVI0 70 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 PHB2Q99623 299 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 RSRP1Q9BUV0 290 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 BET1LQ9NYM9 111 aa13.07□□□□□ -0.32
CD9-209ENST00000540891 PRKDCP78527 4128 aaKnown RBP13.07□□□□□ -0.32
CD9-209ENST00000540891 TEX22C9J3V5 150 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 CTDSPLO15194 276 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 RBMXL2O75526 392 aaKnown RBP13.06□□□□□ -0.32
CD9-209ENST00000540891 IGHV3-11P01762 117 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 MYOD1P15172 320 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 F2RP25116 425 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 MRPS10P82664 201 aaKnown RBP13.06□□□□□ -0.32
CD9-209ENST00000540891 DEFA5Q01523 94 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 ZNF585BQ52M93 769 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 PHLDA2Q53GA4 152 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 RNASE10Q5GAN6 216 aaKnown RBP13.06□□□□□ -0.32
CD9-209ENST00000540891 CMTM1Q8IZ96 169 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 MCFD2Q8NI22 146 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 SOSTQ9BQB4 213 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 PLEKHA2Q9HB19 425 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 ZNF355PQ9NSJ1 428 aa13.06□□□□□ -0.32
CD9-209ENST00000540891 IGHV4OR15-8A0A075B7B6 117 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 A0A087WW49 117 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 TRAV3A0A0B4J244 114 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 CCDC160A6NGH7 325 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 ACTL6BO94805 426 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 NQO2P16083 231 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 TBPP20226 339 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 CD40LGP29965 261 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 TNFSF8P32971 234 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 ZNF616Q08AN1 781 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 IL18Q14116 193 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 LPCAT3Q6P1A2 487 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 ARRDC1Q8N5I2 433 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 OR4A5Q8NH83 315 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 CD300LFQ8TDQ1 290 aa13.05□□□□□ -0.32
CD9-209ENST00000540891 DGCR14Q96DF8 476 aaKnown RBP13.05□□□□□ -0.32
CD9-209ENST00000540891 RSL24D1Q9UHA3 163 aaKnown RBP13.05□□□□□ -0.32
CD9-209ENST00000540891 HMX3A6NHT5 357 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 CGB1A6NKQ9 187 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 IFNA6P05013 189 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 OR8U8P0C7N1 319 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 ZNF735P0CB33 412 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 HOXD3P31249 432 aaPredicted RBP13.04□□□□□ -0.32
CD9-209ENST00000540891 MAS1LP35410 378 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 RPL27AP46776 148 aaKnown RBP13.04□□□□□ -0.32
CD9-209ENST00000540891 TAS2R19P59542 299 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 KRTAP10-11P60412 298 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 RPL8P62917 257 aaKnown RBP13.04□□□□□ -0.32
CD9-209ENST00000540891 SSBP1Q04837 148 aaKnown RBP13.04□□□□□ -0.32
CD9-209ENST00000540891 EGFEM1PQ0D2K5 195 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 TBC1D26Q86UD7 250 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 SLC38A6Q8IZM9 456 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 TTC9CQ8N5M4 171 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 SPIN2AQ99865 258 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 SPIN2BQ9BPZ2 258 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 AIFM2Q9BRQ8 373 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 MCRIP2Q9BUT9 160 aaKnown RBP13.04□□□□□ -0.32
CD9-209ENST00000540891 TMEM140Q9NV12 185 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 AURKAIP1Q9NWT8 199 aaPredicted RBP13.04□□□□□ -0.32
CD9-209ENST00000540891 COA4Q9NYJ1 87 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 COMMD9Q9P000 198 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 RABL2AQ9UBK7 228 aaPredicted RBP13.04□□□□□ -0.32
CD9-209ENST00000540891 RABL2BQ9UNT1 228 aa13.04□□□□□ -0.32
CD9-209ENST00000540891 ZNF701M0R085 212 aaPredicted RBP13.03□□□□□ -0.32
CD9-209ENST00000540891 UPK2O00526 184 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 MPPED1O15442 326 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 RAB3DO95716 219 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 PRH1P02810 166 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 RPA2P15927 270 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 HLA-GP17693 338 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 LPAR6P43657 344 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 ZNF45Q02386 682 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 FAAP20Q6NZ36 180 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 STEAP1BQ6NZ63 245 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 C19orf35Q6ZS72 473 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 MRGPRFQ96AM1 343 aa13.03□□□□□ -0.32
CD9-209ENST00000540891 HRASLSQ9HDD0 168 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms