RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 ZNF806P0C7X5 589 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 SMIM17P0DL12 118 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 BLVRBP30043 206 aaPredicted RBP3.67□□□□□ -1.82
PRKDC-209ENST00000540819 S100A7P31151 101 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 OPRK1P41145 380 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 SERPINB10P48595 397 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 ELF3P78545 371 aaPredicted RBP3.67□□□□□ -1.82
PRKDC-209ENST00000540819 DHRS2Q13268 280 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 HTR4Q13639 388 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 OR8B8Q15620 311 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 FAM104BQ5XKR9 115 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 SCXQ7RTU7 201 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 Q8N9W7 124 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 C1orf54Q8WWF1 131 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 ACOT12Q8WYK0 555 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 B9D2Q9BPU9 175 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 TBL1YQ9BQ87 522 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 SHANK2-AS3Q9BTD1 123 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 NKX6-2Q9C056 277 aaPredicted RBP3.67□□□□□ -1.82
PRKDC-209ENST00000540819 C11orf68Q9H3H3 251 aaKnown RBP3.67□□□□□ -1.82
PRKDC-209ENST00000540819 C21orf62Q9NYP8 219 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 PRSS21Q9Y6M0 314 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 UHRF1BP1Q6BDS2 1440 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 ATAD5Q96QE3 1844 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 BICRAQ9NZM4 1560 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 OTOFQ9HC10 1997 aa3.67□□□□□ -1.82
PRKDC-209ENST00000540819 TRAV9-1A0A075B6T8 112 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 IGHV1-3A0A0C4DH29 117 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 IGKV1-12A0A0C4DH73 117 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 A0A1B0GW54 56 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 TMEM189A5PLL7 270 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 DPRXA6NFQ7 191 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 LINC00587B1AMM8 73 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 TRAPPC2LH3BP13 241 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 J3QRK9 145 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 IGKV1D-12P01611 117 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 PTHLHP12272 177 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 ATP6V0CP27449 155 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 CA5AP35218 305 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 IGLV3-21P80748 117 aaPredicted RBP3.66□□□□□ -1.82
PRKDC-209ENST00000540819 DEFA6Q01524 100 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 SYCNQ0VAF6 134 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 LINC01551Q86U37 167 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 TMEM86AQ8N2M4 240 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 TOMM6Q96B49 74 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 C2orf50Q96LR7 162 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 PEBP4Q96S96 227 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 SPIN2AQ99865 258 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 SPIN2BQ9BPZ2 258 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 IMUPQ9GZP8 106 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 RPUSD1Q9UJJ7 312 aaKnown RBP3.66□□□□□ -1.82
PRKDC-209ENST00000540819 TMEM14AQ9Y6G1 99 aa3.66□□□□□ -1.82
PRKDC-209ENST00000540819 NUP205Q92621 2012 aa3.65□□□□□ -1.82
PRKDC-209ENST00000540819 CACNA1SQ13698 1873 aa3.65□□□□□ -1.82
PRKDC-209ENST00000540819 FMN1Q68DA7 1419 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 CD109Q6YHK3 1445 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 TRAV36DV7A0A075B6V5 113 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 IGHV3-21A0A0B4J1V1 117 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 C5orf58C9J3I9 102 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 K7ERS5 55 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 BET1O15155 118 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 BANF1O75531 89 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 ADRA2AP08913 450 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 ZNF705DP0CH99 300 aaPredicted RBP3.65□□□□□ -1.83
PRKDC-209ENST00000540819 CXCL12P48061 93 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 POLR2HP52434 150 aaKnown RBP3.65□□□□□ -1.83
PRKDC-209ENST00000540819 TAS2R45P59539 299 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 DEFA3P59666 94 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 FKBP1AP62942 108 aaKnown RBP3.65□□□□□ -1.83
PRKDC-209ENST00000540819 HBA1P69905 142 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 BSPH1Q075Z2 132 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 ZNF616Q08AN1 781 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 ENDOGQ14249 297 aaKnown RBP3.65□□□□□ -1.83
PRKDC-209ENST00000540819 WHAMMP3Q1A5X7 153 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 WDR86Q86TI4 376 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 GPHB5Q86YW7 130 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 OR5A1Q8NGJ0 315 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 CIRBP-AS1Q8TBR5 109 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 ITLN2Q8WWU7 325 aaPredicted RBP3.65□□□□□ -1.83
PRKDC-209ENST00000540819 ADAT3Q96EY9 351 aaPredicted RBP3.65□□□□□ -1.83
PRKDC-209ENST00000540819 IMMP1LQ96LU5 166 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 ZNF285Q96NJ3 590 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 VPS25Q9BRG1 176 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 C2orf88Q9BSF0 95 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 TSSK6Q9BXA6 273 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 C1QTNF6Q9BXI9 259 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 VCXQ9H320 206 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 HECW1Q76N89 1606 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 KIAA1671Q9BY89 1806 aa3.65□□□□□ -1.83
PRKDC-209ENST00000540819 AHDC1Q5TGY3 1603 aaPredicted RBP3.64□□□□□ -1.83
PRKDC-209ENST00000540819 A0A1B0GV90 55 aa3.64□□□□□ -1.83
PRKDC-209ENST00000540819 DUXBA0A1W2PPF3 345 aa3.64□□□□□ -1.83
PRKDC-209ENST00000540819 C9JCJ5 164 aa3.64□□□□□ -1.83
PRKDC-209ENST00000540819 CLDN25C9JDP6 229 aa3.64□□□□□ -1.83
PRKDC-209ENST00000540819 F8W036 122 aa3.64□□□□□ -1.83
PRKDC-209ENST00000540819 HLA-DQB1P01920 261 aa3.64□□□□□ -1.83
PRKDC-209ENST00000540819 C1QCP02747 245 aa3.64□□□□□ -1.83
PRKDC-209ENST00000540819 SRP19P09132 144 aaKnown RBP3.64□□□□□ -1.83
PRKDC-209ENST00000540819 OR5AC1P0C628 307 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms