RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 OR9G4Q8NGQ1 327 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 C15orf40Q8WUR7 153 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 SECTM1Q8WVN6 248 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 AP3S1Q92572 193 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 CYYR1Q96J86 154 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 CXorf58Q96LI9 332 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 BET1LQ9NYM9 111 aa8□□□□□ -1.13
CDCA3-208ENST00000540683 COL7A1Q02388 2944 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 SRRM4A7MD48 611 aaKnown RBP7.99□□□□□ -1.13
CDCA3-208ENST00000540683 PPYP01298 95 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 IGLV1-51P01701 117 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 DEFA4P12838 97 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 NQO2P16083 231 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 RPL27AP46776 148 aaKnown RBP7.99□□□□□ -1.13
CDCA3-208ENST00000540683 LINC00205P59089 165 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 RPL8P62917 257 aaKnown RBP7.99□□□□□ -1.13
CDCA3-208ENST00000540683 RHOGP84095 191 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 PJVKQ0ZLH3 352 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 MZT2AQ6P582 158 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 LAX1Q8IWV1 398 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 TMEM167AQ8TBQ9 72 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 CASTOR1Q8WTX7 329 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 SLC25A38Q96DW6 304 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 COMMD5Q9GZQ3 224 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 SLC5A7Q9GZV3 580 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 ALX4Q9H161 411 aaPredicted RBP7.99□□□□□ -1.13
CDCA3-208ENST00000540683 PLEKHA2Q9HB19 425 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 HRASLSQ9HDD0 168 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 SLC2A9Q9NRM0 540 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 TAS2R8Q9NYW2 309 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 COMMD9Q9P000 198 aa7.99□□□□□ -1.13
CDCA3-208ENST00000540683 IGKV1D-8A0A087WSZ0 117 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 TRBV9A0A0B4J1U6 114 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 ANKRD34BA5PLL1 514 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 J3QRK9 145 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 SSX5O60225 188 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 SPNP16150 400 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 PRSS3P35030 304 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 EXOSC2Q13868 293 aaKnown RBP7.98□□□□□ -1.13
CDCA3-208ENST00000540683 FAM106AQ4KMX7 169 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 AADACL3Q5VUY0 350 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 OR4A47Q6IF82 309 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 IDO2Q6ZQW0 420 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 SPAG16Q8N0X2 631 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 CADM3Q8N126 398 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 SAMD12Q8N8I0 201 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 DMBX1Q8NFW5 382 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 OR1L6Q8NGR2 347 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 OR5H2Q8NGV7 314 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 OR6F1Q8NGZ6 308 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 SLC25A46Q96AG3 418 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 EEF1AKMT3Q96AZ1 226 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 SCPEP1Q9HB40 452 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 FAM212BQ9NTI7 297 aaPredicted RBP7.98□□□□□ -1.13
CDCA3-208ENST00000540683 FKBP11Q9NYL4 201 aa7.98□□□□□ -1.13
CDCA3-208ENST00000540683 TENM3Q9P273 2699 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.97□□□□□ -1.13
CDCA3-208ENST00000540683 TRBV7-1A0A0A6YYK4 115 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 IGKV1D-13A0A0B4J2D9 117 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 A8MZ25 164 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 C3orf84H3BNL1 204 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 SULT1C2O00338 296 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 GGCTO75223 188 aaKnown RBP7.97□□□□□ -1.13
CDCA3-208ENST00000540683 TPPPO94811 219 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 GHRHP01286 108 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 APOA1P02647 267 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 IGKV1-13P0DP09 117 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 HLA-GP17693 338 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 SYNJ2BPP57105 145 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 FXYD4P59646 89 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 SSBP2P81877 361 aaPredicted RBP7.97□□□□□ -1.13
CDCA3-208ENST00000540683 DYRK1AQ13627 763 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 POU2AF1Q16633 256 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 C15orf32Q32M92 178 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 OR2B11Q5JQS5 317 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 DHRS11Q6UWP2 260 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 TMEM17Q86X19 198 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 PUSL1Q8N0Z8 303 aaKnown RBP7.97□□□□□ -1.13
CDCA3-208ENST00000540683 RBMXL1Q96E39 390 aaKnown RBP7.97□□□□□ -1.13
CDCA3-208ENST00000540683 C5orf30Q96GV9 206 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 FYTTD1Q96QD9 318 aaKnown RBP7.97□□□□□ -1.13
CDCA3-208ENST00000540683 TSC22D3Q99576 134 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 PALMDQ9NP74 551 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 AKIP1Q9NQ31 210 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 TECRQ9NZ01 308 aaKnown RBP7.97□□□□□ -1.13
CDCA3-208ENST00000540683 EHFQ9NZC4 300 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 PLA2G2EQ9NZK7 142 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 ADAM30Q9UKF2 790 aa7.97□□□□□ -1.13
CDCA3-208ENST00000540683 ELF5Q9UKW6 265 aaPredicted RBP7.97□□□□□ -1.13
CDCA3-208ENST00000540683 SNAPC5O75971 98 aa7.96□□□□□ -1.14
CDCA3-208ENST00000540683 ATG12O94817 140 aa7.96□□□□□ -1.14
CDCA3-208ENST00000540683 IGLV2-14P01704 120 aa7.96□□□□□ -1.14
CDCA3-208ENST00000540683 CRYGCP07315 174 aa7.96□□□□□ -1.14
CDCA3-208ENST00000540683 CLEC2LP0C7M8 214 aa7.96□□□□□ -1.14
CDCA3-208ENST00000540683 ZNF735P0CB33 412 aa7.96□□□□□ -1.14
CDCA3-208ENST00000540683 PSMB6P28072 239 aa7.96□□□□□ -1.14
CDCA3-208ENST00000540683 RPS19P39019 145 aaKnown RBP7.96□□□□□ -1.14
CDCA3-208ENST00000540683 RORCP51449 518 aa7.96□□□□□ -1.14
CDCA3-208ENST00000540683 TSPAN5P62079 268 aa7.96□□□□□ -1.14
CDCA3-208ENST00000540683 ANKRD55Q3KP44 614 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms