RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 GOLT1AQ6ZVE7 132 aa7.49□□□□□ -1.21
YBX3-208ENST00000540447 ZNF525Q8N782 197 aa7.49□□□□□ -1.21
YBX3-208ENST00000540447 ZNF645Q8N7E2 425 aa7.49□□□□□ -1.21
YBX3-208ENST00000540447 FZR1Q9UM11 496 aa7.49□□□□□ -1.21
YBX3-208ENST00000540447 NPIPB6E9PJ23 425 aa7.49□□□□□ -1.21
YBX3-208ENST00000540447 ALKBH6Q3KRA9 238 aa7.49□□□□□ -1.21
YBX3-208ENST00000540447 LINC01551Q86U37 167 aa7.49□□□□□ -1.21
YBX3-208ENST00000540447 PPP1R27Q86WC6 154 aa7.49□□□□□ -1.21
YBX3-208ENST00000540447 SLC37A2Q8TED4 501 aa7.49□□□□□ -1.21
YBX3-208ENST00000540447 FGF22Q9HCT0 170 aa7.49□□□□□ -1.21
YBX3-208ENST00000540447 CLDN14O95500 239 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 ANKRD39Q53RE8 183 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 NFAM1Q8NET5 270 aaPredicted RBP7.48□□□□□ -1.21
YBX3-208ENST00000540447 AMELYQ99218 206 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 PGPEP1Q9NXJ5 209 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 ATP23Q9Y6H3 246 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 SCN4AP35499 1836 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 TRBV20-1A0A075B6N2 111 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 PEX7O00628 323 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 PSG6Q00889 435 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 CDKN3Q16667 212 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 ZNF714Q96N38 554 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 KIR2DL4Q99706 377 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 SARGQ9BW04 601 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 RIMBP3CA6NJZ7 1639 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 RIMBP3BA6NNM3 1639 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 RIMBP3Q9UFD9 1639 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 IGHV2-70DA0A0C4DH43 119 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 TMEM14DPA8MWL7 114 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 ZIC3O60481 467 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 PATE4P0C8F1 98 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 TIMP3P35625 211 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 ZNF83P51522 516 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 PAPPA-AS1Q5QFB9 102 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 ZNF488Q96MN9 340 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 C1QTNF4Q9BXJ3 329 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 FMN2Q9NZ56 1722 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 ZNF638Q14966 1978 aaKnown RBP7.48□□□□□ -1.21
YBX3-208ENST00000540447 IGHV3-21A0A0B4J1V1 117 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 NAPSAO96009 420 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 GZMHP20718 246 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 RND2P52198 227 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 MORN3Q6PF18 240 aaPredicted RBP7.48□□□□□ -1.21
YBX3-208ENST00000540447 GPR82Q96P67 336 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 CT62P0C5K7 136 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 C9orf50Q5SZB4 431 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 VN1R2Q8NFZ6 395 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 RAB1CQ92928 201 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 MRPL27Q9P0M9 148 aaKnown RBP7.48□□□□□ -1.21
YBX3-208ENST00000540447 MON2Q7Z3U7 1717 aa7.48□□□□□ -1.21
YBX3-208ENST00000540447 DLL1O00548 723 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 WISP3O95389 354 aaPredicted RBP7.47□□□□□ -1.21
YBX3-208ENST00000540447 OR2H2O95918 312 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 MOSP00540 346 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 FAM53BQ14153 422 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 TMEM78Q5T7P6 136 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 MAFAQ8NHW3 353 aaPredicted RBP7.47□□□□□ -1.21
YBX3-208ENST00000540447 FBXL7Q9UJT9 491 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 SMAD7O15105 426 aaKnown RBP7.47□□□□□ -1.21
YBX3-208ENST00000540447 NDUFB3O43676 98 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 BGLAPP02818 100 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 IGHV2-26A0A0B4J1V2 119 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 C9JAW5 83 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 CCL2P13500 99 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 SPINK2P20155 84 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 Q6AWC8 147 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 GTSCR1Q86UQ5 136 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 TMUB1Q9BVT8 246 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 A0A1W2PPM0 123 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 GATAD1Q8WUU5 269 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 GAS1P54826 345 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 DSCR4P56555 118 aaPredicted RBP7.47□□□□□ -1.21
YBX3-208ENST00000540447 RAC3P60763 192 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 PLAURQ03405 335 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 ANXA2RQ3ZCQ2 193 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 C10orf91Q5T1B1 145 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 UNQ6494/PRO21346Q6UXR6 183 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 ZNF114Q8NC26 417 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.47□□□□□ -1.21
YBX3-208ENST00000540447 WFDC6Q9BQY6 131 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 PHLDA3Q9Y5J5 127 aa7.47□□□□□ -1.21
YBX3-208ENST00000540447 PDE4DIPQ5VU43 2346 aa7.46□□□□□ -1.21
YBX3-208ENST00000540447 A0A0J9YW62 118 aa7.46□□□□□ -1.21
YBX3-208ENST00000540447 SMPXQ9UHP9 88 aa7.46□□□□□ -1.21
YBX3-208ENST00000540447 TRBV6-7A0A0A0MS04 114 aa7.46□□□□□ -1.21
YBX3-208ENST00000540447 KLRC4-KLRK1H3BQV0 150 aa7.46□□□□□ -1.21
YBX3-208ENST00000540447 SPRY3O43610 288 aa7.46□□□□□ -1.21
YBX3-208ENST00000540447 WDR31Q8NA23 367 aa7.46□□□□□ -1.21
YBX3-208ENST00000540447 TSKUQ8WUA8 353 aa7.46□□□□□ -1.21
YBX3-208ENST00000540447 AGMATQ9BSE5 352 aa7.46□□□□□ -1.21
YBX3-208ENST00000540447 CHAC1Q9BUX1 264 aa7.46□□□□□ -1.21
YBX3-208ENST00000540447 CLEC7AQ9BXN2 247 aa7.46□□□□□ -1.21
YBX3-208ENST00000540447 LSM4Q9Y4Z0 139 aaKnown RBP7.46□□□□□ -1.21
YBX3-208ENST00000540447 H3BTX0 84 aa7.46□□□□□ -1.22
YBX3-208ENST00000540447 J3QT63 122 aa7.46□□□□□ -1.22
YBX3-208ENST00000540447 KLF17Q5JT82 389 aaPredicted RBP7.46□□□□□ -1.22
YBX3-208ENST00000540447 FAM89BQ8N5H3 189 aa7.46□□□□□ -1.22
YBX3-208ENST00000540447 HCSTQ9UBK5 93 aa7.46□□□□□ -1.22
YBX3-208ENST00000540447 SLC25A15Q9Y619 301 aa7.46□□□□□ -1.22
YBX3-208ENST00000540447 R4GN57 208 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms