RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SPATA12Q7Z6I5 190 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 ZNF439Q8NDP4 499 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 OR8B3Q8NGG8 313 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 OCC1Q8TAD7 63 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 OR8B2Q96RD0 313 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 PSENENQ9NZ42 101 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 ZNF816-ZNF321PA0A0X1KG74 233 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 FAM181BA6NEQ2 426 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 K7EP34 96 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 MT-ATP6P00846 226 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 UBE2G1P62253 170 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 HSD52Q0P140 79 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 MYBPHQ13203 477 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 RNPS1Q15287 305 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 SRSF7Q16629 238 aaKnown RBP eCLIP7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 ANKRD37Q7Z713 158 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 C16orf52Q8NHV5 167 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 JMJD8Q96S16 334 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 SSBP4Q9BWG4 385 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 QTRT1Q9BXR0 403 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 NPFFR1Q9GZQ6 430 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 CHODLQ9H9P2 273 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 TIMM9Q9Y5J7 89 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 FREM2Q5SZK8 3169 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 A0A087X0K7 114 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 LRP5LA4QPB2 252 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 CLPSP04118 112 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 PGCP20142 388 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 PSG7Q13046 419 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 GABRA6Q16445 453 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 IZUMO4Q1ZYL8 232 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 RSPO4Q2I0M5 234 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 DOK3Q7L591 496 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 MRPL21Q7Z2W9 205 aaKnown RBP7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 SCCPDHQ8NBX0 429 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 PIGTQ969N2 578 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 COMMD5Q9GZQ3 224 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 HES4Q9HCC6 221 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 CRIM1Q9NZV1 1036 aa7.96□□□□□ -1.14
CTNNA1-243ENST00000540387 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 C2orf72A6NCS6 295 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 BMPR1BO00238 502 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 SPINK4O60575 86 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 MT-ND6P03923 174 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 IGKV3-11P04433 115 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 DEFA4P12838 97 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 CCL1P22362 96 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 RPEL1Q2QD12 228 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 CCDC144NLQ6NUI1 221 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 ZNF818PQ6ZRF7 136 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 TMEM136Q6ZRR5 245 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 MMD2Q8IY49 270 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 OR10G3Q8NGC4 313 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 CT55Q8WUE5 264 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 ULBP2Q9BZM5 246 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 WDR54Q9H977 334 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 SLC7A10Q9NS82 523 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 A0A0G2JMM0 328 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 A0A1W2PPB8 328 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 C2orf70A6NJV1 201 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 C17orf51A8MQB3 221 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 KIR3DP1A8MWS1 328 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 SYNGR2O43760 224 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 CYC1P08574 325 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 PPOXP50336 477 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 Q6ZPA2 131 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 ZNF788Q6ZQV5 615 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 GAPTQ8N292 157 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 EAF1Q96JC9 268 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 GP6Q9HCN6 339 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 KCNIP2Q9NS61 270 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 IL36GQ9NZH8 169 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 ARL2-SNX15V9GYD0 113 aa7.95□□□□□ -1.14
CTNNA1-243ENST00000540387 PIEZO1Q92508 2521 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 hDV102S1A0JD36 115 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 C5orf63A6NC05 138 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 OR4C46A6NHA9 309 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 K7EQM0 130 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 SLC38A11Q08AI6 406 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 TNXAQ16473 311 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 SDK2Q58EX2 2172 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 TCTEX1D4Q5JR98 221 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 PRAMEF5Q5TYX0 476 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 PRAMEF6Q5VXH4 476 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 OR5A2Q8NGI9 324 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 AP1S3Q96PC3 154 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 PGPEP1Q9NXJ5 209 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 TEX48A0A1B0GUV7 120 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 GAGE12HA6NDE8 117 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 E9PLN8 166 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 ANGPTL7O43827 346 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 AGFG2O95081 481 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 IGHG1P01857 330 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 RPL24P83731 157 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 HIST1H1AQ02539 215 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 TGFBR3Q03167 851 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 Q6ZRM9 215 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 ZDHHC23Q8IYP9 409 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 KIR3DL3Q8N743 410 aa7.94□□□□□ -1.14
CTNNA1-243ENST00000540387 OR5D13Q8NGL4 314 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms