RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 MCRIP2Q9BUT9 160 aaKnown RBP11.63□□□□□ -0.55
UBE3B-212ENST00000540230 CCDC59Q9P031 241 aaKnown RBP11.63□□□□□ -0.55
UBE3B-212ENST00000540230 WI2-2373I1.2A0A1W2PRP0 233 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 HMX3A6NHT5 357 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 TEX22C9J3V5 150 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 H3BUA1 57 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 RBFOX2O43251 390 aaKnown RBP eCLIP11.62□□□□□ -0.55
UBE3B-212ENST00000540230 PRH1P02810 166 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 OR8U8P0C7N1 319 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 CD40LGP29965 261 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 OR4A47Q6IF82 309 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 REC114Q7Z4M0 266 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 MRAPQ8TCY5 172 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 DCUN1D4Q92564 292 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 DLX4Q92988 240 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-212ENST00000540230 TMEM68Q96MH6 324 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 TINAGL1Q9GZM7 467 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-212ENST00000540230 COA4Q9NYJ1 87 aa11.62□□□□□ -0.55
UBE3B-212ENST00000540230 TRAV3A0A0B4J244 114 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 CGB1A6NKQ9 187 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 LINC01619G3V211 115 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 K7EIL1 84 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 ACTL6BO94805 426 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 HRASP01112 189 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 CD3DP04234 171 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 IL6RP08887 468 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-212ENST00000540230 OR9G9P0C7N8 305 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 RPA2P15927 270 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 TSPAN5P62079 268 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 DGCR2P98153 550 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 ZNF45Q02386 682 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 PHLDA2Q53GA4 152 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 VAX1Q5SQQ9 334 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 VSTM2AQ8TAG5 236 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 DPF1Q92782 380 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 SLIRPQ9GZT3 109 aaKnown RBP11.61□□□□□ -0.55
UBE3B-212ENST00000540230 MTFP1Q9UDX5 166 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 CEPT1Q9Y6K0 416 aa11.61□□□□□ -0.55
UBE3B-212ENST00000540230 SEC14L6B5MCN3 397 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 GPR31O00270 319 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 MPPED1O15442 326 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 CREBL2O60519 120 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-212ENST00000540230 HPRT1P00492 218 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 RPL27AP46776 148 aaKnown RBP11.6□□□□□ -0.55
UBE3B-212ENST00000540230 POU2AF1Q16633 256 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 OR4D10Q8NGI6 311 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 GPR61Q9BZJ8 451 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 BET1LQ9NYM9 111 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 SCOCQ9UIL1 159 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 BRI3O95415 125 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 TRBV12-3P01733 135 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 HSPB1P04792 205 aaKnown RBP11.6□□□□□ -0.55
UBE3B-212ENST00000540230 NQO2P16083 231 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 TAS2R31P59538 309 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 RPL8P62917 257 aaKnown RBP11.6□□□□□ -0.55
UBE3B-212ENST00000540230 ZNF585BQ52M93 769 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 C9orf66Q5T8R8 295 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 FCAMRQ8WWV6 532 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 BORCS5Q969J3 196 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 FYTTD1Q96QD9 318 aaKnown RBP11.6□□□□□ -0.55
UBE3B-212ENST00000540230 SPIN2AQ99865 258 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 SPIN2BQ9BPZ2 258 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 RSRP1Q9BUV0 290 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 PLEKHA2Q9HB19 425 aa11.6□□□□□ -0.55
UBE3B-212ENST00000540230 C13orf42A0A1B0GVH6 325 aa11.59□□□□□ -0.55
UBE3B-212ENST00000540230 ANKRD34BA5PLL1 514 aa11.59□□□□□ -0.55
UBE3B-212ENST00000540230 OVOL1O14753 267 aa11.59□□□□□ -0.55
UBE3B-212ENST00000540230 TPPPO94811 219 aa11.59□□□□□ -0.55
UBE3B-212ENST00000540230 ZNF735P0CB33 412 aa11.59□□□□□ -0.55
UBE3B-212ENST00000540230 AREGP15514 252 aa11.59□□□□□ -0.55
UBE3B-212ENST00000540230 F2RP25116 425 aa11.59□□□□□ -0.55
UBE3B-212ENST00000540230 LHFPL1Q86WI0 220 aa11.59□□□□□ -0.55
UBE3B-212ENST00000540230 TTC9CQ8N5M4 171 aa11.59□□□□□ -0.55
UBE3B-212ENST00000540230 DGCR14Q96DF8 476 aaKnown RBP11.59□□□□□ -0.55
UBE3B-212ENST00000540230 C6orf62Q9GZU0 229 aaPredicted RBP11.59□□□□□ -0.55
UBE3B-212ENST00000540230 HRASLSQ9HDD0 168 aa11.59□□□□□ -0.55
UBE3B-212ENST00000540230 TMEM140Q9NV12 185 aa11.59□□□□□ -0.55
UBE3B-212ENST00000540230 TRBV9A0A0B4J1U6 114 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 GABARAPH6UMI1 98 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 UPK2O00526 184 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 NOL3O60936 208 aaKnown RBP11.58□□□□□ -0.56
UBE3B-212ENST00000540230 HLA-GP17693 338 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 MAS1LP35410 378 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 LPAR6P43657 344 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 RNASE10Q5GAN6 216 aaKnown RBP11.58□□□□□ -0.56
UBE3B-212ENST00000540230 FAAP20Q6NZ36 180 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 TBC1D26Q86UD7 250 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 CMTM1Q8IZ96 169 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 DMBX1Q8NFW5 382 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 CD300LFQ8TDQ1 290 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 DIRAS2Q96HU8 199 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 RBM38Q9H0Z9 239 aaKnown RBP11.58□□□□□ -0.56
UBE3B-212ENST00000540230 AKIP1Q9NQ31 210 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 COMMD9Q9P000 198 aa11.58□□□□□ -0.56
UBE3B-212ENST00000540230 A0A0G2JLM5 398 aa11.57□□□□□ -0.56
UBE3B-212ENST00000540230 MARCH11A6NNE9 402 aa11.57□□□□□ -0.56
UBE3B-212ENST00000540230 CD74P04233 296 aa11.57□□□□□ -0.56
UBE3B-212ENST00000540230 REG1AP05451 166 aa11.57□□□□□ -0.56
UBE3B-212ENST00000540230 PI3P19957 117 aa11.57□□□□□ -0.56
UBE3B-212ENST00000540230 UCP3P55916 312 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms