RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 S1PR2O95136 353 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 HPRT1P00492 218 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 CD74P04233 296 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 MYOD1P15172 320 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 RAB25P57735 213 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 TPPP2P59282 170 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 PHLDA2Q53GA4 152 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 OR4A47Q6IF82 309 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 POC5Q8NA72 575 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 TMEM229BQ8NBD8 167 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 SMIM4Q8WVI0 70 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 PHB2Q99623 299 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 SOSTQ9BQB4 213 aa14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 RSL24D1Q9UHA3 163 aaKnown RBP14.17□□□□□ -0.14
SNRPA1-203ENST00000540017 DNAH3Q8TD57 4116 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 TRAV3A0A0B4J244 114 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 CTDSPLO15194 276 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 RBMXL2O75526 392 aaKnown RBP14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 IGHV3-11P01762 117 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 TRGV3P03979 118 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 IL6RP08887 468 aaPredicted RBP14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 RPA2P15927 270 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 UCP3P55916 312 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 MRPS10P82664 201 aaKnown RBP14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 DEFA5Q01523 94 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 POU2AF1Q16633 256 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 ZNF585BQ52M93 769 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 FOXB2Q5VYV0 432 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 LHFPL1Q86WI0 220 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 CMTM1Q8IZ96 169 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 OR1N2Q8NGR9 330 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 VSTM2AQ8TAG5 236 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 DGCR14Q96DF8 476 aaKnown RBP14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 TMEM68Q96MH6 324 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 SLA2Q9H6Q3 261 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 PLEKHA2Q9HB19 425 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 ZNF355PQ9NSJ1 428 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 BET1LQ9NYM9 111 aa14.16□□□□□ -0.14
SNRPA1-203ENST00000540017 HMX3A6NHT5 357 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 TEX22C9J3V5 150 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 CREBL2O60519 120 aaPredicted RBP14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 ACTL6BO94805 426 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 IFNA6P05013 189 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 LGALS1P09382 135 aaKnown RBP14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 TBPP20226 339 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 F2RP25116 425 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 LPAR6P43657 344 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 TAS2R31P59538 309 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 TAS2R19P59542 299 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 FAAP20Q6NZ36 180 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 STEAP1BQ6NZ63 245 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 LPCAT3Q6P1A2 487 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 ADAD2Q8NCV1 583 aaKnown RBP14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 CD300LFQ8TDQ1 290 aa14.15□□□□□ -0.14
SNRPA1-203ENST00000540017 CGB1A6NKQ9 187 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 H3BUA1 57 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 RAB3DO95716 219 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 OR9G9P0C7N8 305 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 ZNF735P0CB33 412 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 NQO2P16083 231 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 PI3P19957 117 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 CD40LGP29965 261 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 RPL8P62917 257 aaKnown RBP14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 SSBP1Q04837 148 aaKnown RBP14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 ZNF616Q08AN1 781 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 PDLIM3Q53GG5 364 aaPredicted RBP14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 TBC1D26Q86UD7 250 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 SLC38A6Q8IZM9 456 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 ARRDC1Q8N5I2 433 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 MRGPRFQ96AM1 343 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 SPIN2AQ99865 258 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 SPIN2BQ9BPZ2 258 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 HRASLSQ9HDD0 168 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 COA4Q9NYJ1 87 aa14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 PRKDCP78527 4128 aaKnown RBP14.14□□□□□ -0.15
SNRPA1-203ENST00000540017 IGHV4OR15-8A0A075B7B6 117 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 A0A087WW49 117 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 ZNF701M0R085 212 aaPredicted RBP14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 UPK2O00526 184 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 MPPED1O15442 326 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 BRI3O95415 125 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 DUS4LO95620 317 aaKnown RBP14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 PRH1P02810 166 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 MAS1LP35410 378 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 RPL27AP46776 148 aaKnown RBP14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 C19orf35Q6ZS72 473 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 OR4A5Q8NH83 315 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 SLC2A9Q9NRM0 540 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 TMEM140Q9NV12 185 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 COMMD9Q9P000 198 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 RABL2AQ9UBK7 228 aaPredicted RBP14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 RABL2BQ9UNT1 228 aa14.13□□□□□ -0.15
SNRPA1-203ENST00000540017 FABP12A6NFH5 140 aa14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 GSTZ1O43708 216 aaPredicted RBP14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 PGAM2P15259 253 aa14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 HLA-GP17693 338 aa14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 HOXD3P31249 432 aaPredicted RBP14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 PPP5CP53041 499 aa14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 KRTAP10-11P60412 298 aa14.12□□□□□ -0.15
SNRPA1-203ENST00000540017 ZNF45Q02386 682 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms