RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 M0R1X1 148 aa13.84□□□□□ -0.19
COPS3-212ENST00000539941 RBFOX2O43251 390 aaKnown RBP eCLIP13.84□□□□□ -0.19
COPS3-212ENST00000539941 PROP1O75360 226 aa13.84□□□□□ -0.19
COPS3-212ENST00000539941 FAM71E2Q8N5Q1 922 aa13.84□□□□□ -0.19
COPS3-212ENST00000539941 BEND2Q8NDZ0 799 aa13.84□□□□□ -0.19
COPS3-212ENST00000539941 ZNF596Q8TC21 504 aa13.84□□□□□ -0.19
COPS3-212ENST00000539941 LEAP2Q969E1 77 aa13.84□□□□□ -0.19
COPS3-212ENST00000539941 ADTRPQ96IZ2 230 aa13.84□□□□□ -0.19
COPS3-212ENST00000539941 YLPM1P49750 1951 aaKnown RBP13.84□□□□□ -0.19
COPS3-212ENST00000539941 SAA2-SAA4A0A096LPE2 208 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 LINC00473A8K010 186 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 E5RGE8 158 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 LY86O95711 162 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 SCGB1D2O95969 90 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 SAA2P0DJI9 122 aaPredicted RBP13.83□□□□□ -0.2
COPS3-212ENST00000539941 NKX2-1P43699 371 aaPredicted RBP13.83□□□□□ -0.2
COPS3-212ENST00000539941 UTF1Q5T230 341 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 ODF3L1Q8IXM7 274 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 LINC00311Q8N616 119 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 OR13D1Q8NGV5 346 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 LYPD6BQ8NI32 183 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 GPR146Q96CH1 333 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 S1PR3Q99500 378 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 UNKLQ9H9P5 680 aaKnown RBP13.83□□□□□ -0.2
COPS3-212ENST00000539941 NSG2Q9Y328 171 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 LSM5Q9Y4Y9 91 aaKnown RBP13.83□□□□□ -0.2
COPS3-212ENST00000539941 DOCK11Q5JSL3 2073 aa13.83□□□□□ -0.2
COPS3-212ENST00000539941 RAMP3O60896 148 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 PITX3O75364 302 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 MED6O75586 246 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 IGKV1-5P01602 117 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 IGHV3-7P01780 117 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 THBS3P49746 956 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 BRWD1-AS2P59051 145 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 RPL39P5Q59GN2 51 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 SP5Q6BEB4 398 aaPredicted RBP13.82□□□□□ -0.2
COPS3-212ENST00000539941 LYG1Q8N1E2 194 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 PLEKHA2Q9HB19 425 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 MMP24Q9Y5R2 645 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 IGHV1-8P0DP01 117 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 GNG10P50151 68 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 ID3Q02535 119 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 NCR3LG1Q68D85 454 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 FAM71F2Q6NXP2 309 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 FOXRED2Q8IWF2 684 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 LY6G5BQ8NDX9 201 aa13.82□□□□□ -0.2
COPS3-212ENST00000539941 PPIAL4CA0A0B4J2A2 164 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 A0A0G2JRQ6 117 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 hCG_1809904A0A1W2PP81 198 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 A0A1W2PPE2 198 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 A0A1W2PR64 198 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 A0A1W2PRV1 198 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 M0R036 132 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 NDUFS7O75251 213 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 GAPDHP04406 335 aaKnown RBP13.81□□□□□ -0.2
COPS3-212ENST00000539941 SNRNP70P08621 437 aaKnown RBP13.81□□□□□ -0.2
COPS3-212ENST00000539941 PPIAL4GP0DN37 164 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 MMP9P14780 707 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 GNB2P62879 340 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 NHLH2Q02577 135 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 ZNF816Q0VGE8 651 aaPredicted RBP13.81□□□□□ -0.2
COPS3-212ENST00000539941 C11orf42Q8N5U0 333 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 DDB2Q92466 427 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 TNFRSF14Q92956 283 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 CCL19Q99731 98 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 MALRD1Q5VYJ5 2156 aa13.81□□□□□ -0.2
COPS3-212ENST00000539941 S1PR2O95136 353 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 HPRT1P00492 218 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 LIPFP07098 398 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 P0C879 139 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 COX6B1P14854 86 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 P2RY1P47900 373 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 SULT1A1P50225 295 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 OR2B8PP59922 312 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 ZNF833PQ6ZTB9 187 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 OR9G1Q8NH87 305 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 PBDC1Q9BVG4 233 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 SSBP3Q9BWW4 388 aaPredicted RBP13.8□□□□□ -0.2
COPS3-212ENST00000539941 CACNG5Q9UF02 275 aa13.8□□□□□ -0.2
COPS3-212ENST00000539941 RCL1Q9Y2P8 373 aaKnown RBP13.8□□□□□ -0.2
COPS3-212ENST00000539941 J3QR06 171 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 PPP1R2P9O14990 202 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 EPHA1P21709 976 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 NUTF2P61970 127 aaKnown RBP13.79□□□□□ -0.2
COPS3-212ENST00000539941 UBAC2Q8NBM4 344 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 OR4S2Q8NH73 311 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 TMEM133Q9H2Q1 129 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 ARID1AO14497 2285 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 LRBAP50851 2863 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 A0A1B0GW64 132 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 FAM90A26D6RGX4 464 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 FCGR3BO75015 233 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 ERVFRD-1P60508 538 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 CXorf66Q5JRM2 361 aaPredicted RBP13.79□□□□□ -0.2
COPS3-212ENST00000539941 GPR157Q5UAW9 335 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 FAM24BQ8N5W8 94 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 LFNGQ8NES3 379 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 C11orf1Q9H5F2 150 aa13.79□□□□□ -0.2
COPS3-212ENST00000539941 CXorf65A6NEN9 183 aa13.78□□□□□ -0.2
COPS3-212ENST00000539941 MSGN1A6NI15 193 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms