RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 MAP1LC3CQ9BXW4 147 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 CDIP1Q9H305 208 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 MAP1LC3AQ9H492 121 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 TNFRSF19Q9NS68 423 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 LIN7CQ9NUP9 197 aaKnown RBP5.15□□□□□ -1.59
SNHG1-211ENST00000539921 MTCH1Q9NZJ7 389 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 POLDIP2Q9Y2S7 368 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 EMC9Q9Y3B6 208 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 LOXL2Q9Y4K0 774 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 OR1A2Q9Y585 309 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 HEBP2Q9Y5Z4 205 aa5.15□□□□□ -1.59
SNHG1-211ENST00000539921 A0A096LPE4 126 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 A0A1W2PPZ6 126 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 A1L4Q6 167 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A10PA6NDY2 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A18PA6NE21 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A16PA6NEW6 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 TMEM202A6NGA9 273 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A20PA6NIJ5 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A8PA6NJQ4 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A7PA6NKC0 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 C17orf51A8MQB3 221 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A22PA8MWA6 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A12PA8MX19 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A5PA8MXJ8 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A23PA8MXZ1 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 B5MCH6 92 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 E9PLD3 99 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 C11orf98E9PRG8 122 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 RHODO00212 210 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 PRKNO60260 465 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-211ENST00000539921 CA1P00915 261 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-211ENST00000539921 TGFAP01135 160 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 CRYGBP07316 175 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A15PP0C7V4 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A13PP0C7W8 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A14PP0C7W9 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM90A24PP0C7X0 464 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 SMIM13P0DJ93 91 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 CPMP14384 443 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 NTF3P20783 257 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 CD38P28907 300 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 TMPRSS3P57727 454 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 MEF2CQ06413 473 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-211ENST00000539921 PRDX1Q06830 199 aaKnown RBP5.14□□□□□ -1.59
SNHG1-211ENST00000539921 MRPL23Q16540 153 aaKnown RBP5.14□□□□□ -1.59
SNHG1-211ENST00000539921 RTL8BQ17RB0 113 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 CLEC12BQ2HXU8 276 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 CEACAM16Q2WEN9 425 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 CXorf66Q5JRM2 361 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-211ENST00000539921 SPATA31B1PQ5VZV4 182 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 Q6AWC8 147 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 TMEM211Q6ICI0 200 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 LCN12Q6JVE5 192 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 SLC23A3Q6PIS1 610 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 FAM231DQ6ZW35 169 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 C1QL2Q7Z5L3 287 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 ZNF547Q8IVP9 402 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 KLHDC9Q8NEP7 349 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 OR8B12Q8NGG6 310 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 C16orf52Q8NHV5 167 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 CT55Q8WUE5 264 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 ADAT3Q96EY9 351 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-211ENST00000539921 TM2D2Q9BX73 214 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 RTN4RQ9BZR6 473 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 NXF5Q9H1B4 397 aaKnown RBP5.14□□□□□ -1.59
SNHG1-211ENST00000539921 VSIRQ9H7M9 311 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 LYRM4Q9HD34 91 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 RAB9BQ9NP90 201 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 B4GALT6Q9UBX8 382 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 TAC3Q9UHF0 121 aa5.14□□□□□ -1.59
SNHG1-211ENST00000539921 CSDC2Q9Y534 153 aaKnown RBP5.14□□□□□ -1.59
SNHG1-211ENST00000539921 TIMM13Q9Y5L4 95 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-211ENST00000539921 VWA8A3KMH1 1905 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 TRBV20OR9-2A0A075B6H5 130 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 A0A087X0K7 114 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 IGHV1-24A0A0C4DH33 117 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 KIR2DS1A0A191URI9 304 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 ZNF850A8MQ14 1090 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 LINC01619G3V211 115 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 SMAD7O15105 426 aaKnown RBP5.13□□□□□ -1.59
SNHG1-211ENST00000539921 KLF7O75840 302 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-211ENST00000539921 TUSC2O75896 110 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 NEURL1O76050 574 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 STC2O76061 302 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 NDUFB4O95168 129 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 LEPROTL1O95214 131 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 CXorf1O96002 111 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 PPYP01298 95 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 ZNF823P16415 610 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 GABRG2P18507 467 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 ID1P41134 155 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 FASLGP48023 281 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 FOXG1P55316 489 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-211ENST00000539921 CLDN17P56750 224 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 RPS28P62857 69 aaKnown RBP5.13□□□□□ -1.59
SNHG1-211ENST00000539921 TNP2Q05952 138 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 SLC38A11Q08AI6 406 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 FUT7Q11130 342 aa5.13□□□□□ -1.59
SNHG1-211ENST00000539921 KIR2DS1Q14954 304 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms