RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 HAPLN4Q86UW8 402 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 DTX2Q86UW9 622 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 TGIF2LYQ8IUE0 185 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 NAV2Q8IVL1 2488 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 OR5AN1Q8NGI8 311 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 OR4C13Q8NGP0 309 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 MBD3L1Q8WWY6 194 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 LEAP2Q969E1 77 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 FLYWCH2Q96CP2 140 aaKnown RBP8.33□□□□□ -1.08
SPARC-209ENST00000539687 OR4C12Q96R67 309 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 TMEM133Q9H2Q1 129 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 PLEKHA3Q9HB20 300 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 CTSZQ9UBR2 303 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 TCF19Q9Y242 345 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 WASHC3Q9Y3C0 194 aa8.33□□□□□ -1.08
SPARC-209ENST00000539687 A0A1W2PN81 502 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 RBFOX3A6NFN3 312 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 PMS2P5A8MQ11 134 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 INS-IGF2F8WCM5 200 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 UPK2O00526 184 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 AGPAT2O15120 278 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 SIAH2O43255 324 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 KBTBD11O94819 623 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 HSPB1P04792 205 aaKnown RBP8.32□□□□□ -1.08
SPARC-209ENST00000539687 CT45A6P0DMU7 189 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 CT45A5P0DMU8 189 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 CT45A7P0DMV0 189 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 CCL3L1P16619 93 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 FGF7P21781 194 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 USF1P22415 310 aaPredicted RBP8.32□□□□□ -1.08
SPARC-209ENST00000539687 CHRNA7P36544 502 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 LGALS7P47929 136 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 PPT1P50897 306 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 DLX6P56179 175 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 ERVFRD-1P60508 538 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 RUNX1Q01196 453 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 RAB31Q13636 194 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 LY6DQ14210 128 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 KHDC3LQ587J8 217 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 C11orf71Q6IPW1 123 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 LYPD2Q6UXB3 125 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 ETV3LQ6ZN32 361 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 SSX9Q7RTT3 188 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 TGIF2LXQ8IUE1 241 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 BEND2Q8NDZ0 799 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 SLC24A4Q8NFF2 622 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 LHX4Q969G2 390 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 SLC35B3Q9H1N7 401 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 CHODLQ9H9P2 273 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 OR51B2Q9Y5P1 312 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 PTPRQQ9UMZ3 2332 aa8.32□□□□□ -1.08
SPARC-209ENST00000539687 RAI1Q7Z5J4 1906 aaPredicted RBP8.32□□□□□ -1.08
SPARC-209ENST00000539687 A0A1W2PPE3 182 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 C15orf62A8K5M9 175 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 H0YJW9 148 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 CYB5BO43169 146 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 MMP23AO75900 390 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 IGHV3-7P01780 117 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 LIPFP07098 398 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 IL6RP08887 468 aaPredicted RBP8.31□□□□□ -1.08
SPARC-209ENST00000539687 NPY1RP25929 384 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 GRNP28799 593 aaKnown RBP8.31□□□□□ -1.08
SPARC-209ENST00000539687 CD1BP29016 333 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 PRCDQ00LT1 54 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 AKR1C1Q04828 323 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 ARL16Q0P5N6 197 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 ACOT6Q3I5F7 207 aaPredicted RBP8.31□□□□□ -1.08
SPARC-209ENST00000539687 VMA21Q3ZAQ7 101 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 ZNF506Q5JVG8 444 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 ZNF787Q6DD87 383 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 RBMS3Q6XE24 437 aaKnown RBP8.31□□□□□ -1.08
SPARC-209ENST00000539687 ABHD12Q8N2K0 398 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 OR10G4Q8NGN3 311 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 SFT2D1Q8WV19 159 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 HARBI1Q96MB7 349 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 P2RX4Q99571 388 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 RNF5Q99942 180 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 CLEC7AQ9BXN2 247 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 ACTR3CQ9C0K3 210 aaPredicted RBP8.31□□□□□ -1.08
SPARC-209ENST00000539687 WDR83OSQ9Y284 106 aa8.31□□□□□ -1.08
SPARC-209ENST00000539687 KIAA2026Q5HYC2 2103 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 CTXND1A0A1B0GTU2 59 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 FAM157AC9JC47 383 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 IFNA4P05014 189 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 ADCYAP1P18509 176 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 COL8A2P25067 703 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 FHITP49789 147 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 SUB1P53999 127 aaKnown RBP eCLIP8.3□□□□□ -1.08
SPARC-209ENST00000539687 ERHP84090 104 aaKnown RBP8.3□□□□□ -1.08
SPARC-209ENST00000539687 BTN1A1Q13410 526 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 SPSB3Q6PJ21 355 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 ITLN2Q8WWU7 325 aaPredicted RBP8.3□□□□□ -1.08
SPARC-209ENST00000539687 ST6GALNAC6Q969X2 333 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 NABP2Q9BQ15 211 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 RSG1Q9BU20 258 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 NPCDR1Q9BY65 106 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 MRPL20Q9BYC9 149 aaKnown RBP8.3□□□□□ -1.08
SPARC-209ENST00000539687 COMMD5Q9GZQ3 224 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 TMEM231Q9H6L2 316 aa8.3□□□□□ -1.08
SPARC-209ENST00000539687 NPVFQ9HCQ7 196 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms