RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 IRF2P14316 349 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 MMP9P14780 707 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 GABRA2P47869 451 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 RND2P52198 227 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 PHLDA2Q53GA4 152 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 KHDC3LQ587J8 217 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 LIAT1Q6ZQX7 453 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 ZNF295-AS1Q8N0V1 137 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 OR1L1Q8NH94 360 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 Q8WTZ3 238 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 PACRGQ96M98 296 aaPredicted RBP7.31□□□□□ -1.24
DDB1-213ENST00000539332 SPIN2AQ99865 258 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 SPIN2BQ9BPZ2 258 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 CTDSP1Q9GZU7 261 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 RAB1BQ9H0U4 201 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 ZNF665Q9H7R5 613 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 LINC00574Q9H8X3 128 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 PRR13Q9NZ81 148 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 MMP24Q9Y5R2 645 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 CSMD2Q7Z408 3487 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 MED13LQ71F56 2210 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 TRBV24-1A0A075B6N3 115 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 IGHV1-69-2A0A0G2JMI3 117 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 F2RL2O00254 374 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 CDS2O95674 445 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 RD3LP0DJH9 198 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 DLK1P80370 383 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 NHLH2Q02577 135 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 BAXQ07812 192 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 GAMTQ14353 236 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 JOSD1Q15040 202 aaPredicted RBP7.31□□□□□ -1.24
DDB1-213ENST00000539332 CLEC9AQ6UXN8 241 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 TMEM182Q6ZP80 229 aaPredicted RBP7.31□□□□□ -1.24
DDB1-213ENST00000539332 MRPL52Q86TS9 123 aaKnown RBP7.31□□□□□ -1.24
DDB1-213ENST00000539332 ZNRF1Q8ND25 227 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 MRGPRDQ8TDS7 321 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 IL1F10Q8WWZ1 152 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 CCL17Q92583 94 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 CORO2AQ92828 525 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 GALMQ96C23 342 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 C18orf12Q96KH6 178 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 FAM210BQ96KR6 192 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 TMEM68Q96MH6 324 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 TP53RKQ96S44 253 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 NEU1Q99519 415 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 NDUFAF3Q9BU61 184 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 ACTR3CQ9C0K3 210 aaPredicted RBP7.31□□□□□ -1.24
DDB1-213ENST00000539332 PARP12Q9H0J9 701 aaKnown RBP7.31□□□□□ -1.24
DDB1-213ENST00000539332 WFDC1Q9HC57 220 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 TMEM106BQ9NUM4 274 aa7.31□□□□□ -1.24
DDB1-213ENST00000539332 TRAV1-1A0A0B4J248 108 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 DUXBA0A1W2PPF3 345 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 H0Y980 276 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 CLDN34H7C241 214 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 OVOL3O00110 214 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 CYB5BO43169 146 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 SCAF4O95104 1147 aaKnown RBP7.3□□□□□ -1.24
DDB1-213ENST00000539332 GCGP01275 180 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 GZMHP20718 246 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 UCP1P25874 307 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 PPP1CCP36873 323 aaKnown RBP7.3□□□□□ -1.24
DDB1-213ENST00000539332 CDKN1AP38936 164 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 EIF4EBP1Q13541 118 aaPredicted RBP7.3□□□□□ -1.24
DDB1-213ENST00000539332 SPNS3Q6ZMD2 512 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 TCF23Q7RTU1 214 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 TBC1D26Q86UD7 250 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 TMEM183AQ8IXX5 376 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 TPRX1Q8N7U7 411 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 OR2G3Q8NGZ4 309 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 NEU4Q8WWR8 484 aaPredicted RBP7.3□□□□□ -1.24
DDB1-213ENST00000539332 IGFBPL1Q8WX77 278 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 TMEM56Q96MV1 263 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 GPR61Q9BZJ8 451 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 TMEM222Q9H0R3 208 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 CCL28Q9NRJ3 127 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 OR6C3Q9NZP0 311 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 KAAG1Q9UBP8 84 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 JPT1Q9UK76 154 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 WSB1Q9Y6I7 421 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 TMEM56-RWDD3S4R434 201 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 CCDC168Q8NDH2 2452 aa7.3□□□□□ -1.24
DDB1-213ENST00000539332 MALRD1Q5VYJ5 2156 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 PPIAL4EA0A075B759 164 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 C3orf85A0A1B0GTC6 90 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 NKX6-3A6NJ46 265 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 PPIAL4DF5H284 164 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 ITGB1BP1O14713 200 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 TCAPO15273 167 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 SPINT2O43291 252 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 PGLYRP1O75594 196 aaPredicted RBP7.29□□□□□ -1.24
DDB1-213ENST00000539332 FCN3O75636 299 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 DFFBO76075 338 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 LY6HO94772 140 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 GYPAP02724 150 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 CXCL1P09341 107 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 PPIAL4FP0DN26 164 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 FABP4P15090 132 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 IL2RGP31785 369 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 SSTR5P35346 364 aa7.29□□□□□ -1.24
DDB1-213ENST00000539332 EWSR1Q01844 656 aaKnown RBP eCLIP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms