RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 OR4A16Q8NH70 328 aa20.77■□□□□ 0.92
KLHL42-202ENST00000539176 ZNF714Q96N38 554 aa20.77■□□□□ 0.92
KLHL42-202ENST00000539176 OR4C12Q96R67 309 aa20.77■□□□□ 0.92
KLHL42-202ENST00000539176 TIMM9Q9Y5J7 89 aa20.77■□□□□ 0.92
KLHL42-202ENST00000539176 A0A1W2PPE3 182 aa20.77■□□□□ 0.92
KLHL42-202ENST00000539176 GUCA2BQ16661 112 aa20.77■□□□□ 0.92
KLHL42-202ENST00000539176 CLCC1Q96S66 551 aa20.77■□□□□ 0.92
KLHL42-202ENST00000539176 TMEM147Q9BVK8 224 aa20.77■□□□□ 0.92
KLHL42-202ENST00000539176 SCRT1Q9BWW7 348 aa20.77■□□□□ 0.92
KLHL42-202ENST00000539176 SPG11Q96JI7 2443 aa20.77■□□□□ 0.91
KLHL42-202ENST00000539176 OR9G9P0C7N8 305 aa20.76■□□□□ 0.91
KLHL42-202ENST00000539176 RPP30P78346 268 aaKnown RBP20.76■□□□□ 0.91
KLHL42-202ENST00000539176 WDR25Q64LD2 544 aaPredicted RBP20.76■□□□□ 0.91
KLHL42-202ENST00000539176 ZNF429Q86V71 674 aa20.76■□□□□ 0.91
KLHL42-202ENST00000539176 OR10P1Q8NGE3 313 aa20.76■□□□□ 0.91
KLHL42-202ENST00000539176 EIF5A2Q9GZV4 153 aaKnown RBP20.76■□□□□ 0.91
KLHL42-202ENST00000539176 PATZ1Q9HBE1 687 aaKnown RBP20.76■□□□□ 0.91
KLHL42-202ENST00000539176 KIAA1456Q9P272 454 aa20.76■□□□□ 0.91
KLHL42-202ENST00000539176 ARHGAP32A7KAX9 2087 aa20.76■□□□□ 0.91
KLHL42-202ENST00000539176 DHRS7BQ6IAN0 325 aaPredicted RBP20.75■□□□□ 0.91
KLHL42-202ENST00000539176 RBMXL1Q96E39 390 aaKnown RBP20.75■□□□□ 0.91
KLHL42-202ENST00000539176 QTRT1Q9BXR0 403 aaKnown RBP20.75■□□□□ 0.91
KLHL42-202ENST00000539176 FBXO7Q9Y3I1 522 aa20.75■□□□□ 0.91
KLHL42-202ENST00000539176 TACC2O95359 2948 aa20.75■□□□□ 0.91
KLHL42-202ENST00000539176 TRAV1-1A0A0B4J248 108 aa20.75■□□□□ 0.91
KLHL42-202ENST00000539176 KRTAP10-9P60411 292 aa20.75■□□□□ 0.91
KLHL42-202ENST00000539176 POU2AF1Q16633 256 aa20.75■□□□□ 0.91
KLHL42-202ENST00000539176 HIST2H2BCQ6DN03 193 aa20.75■□□□□ 0.91
KLHL42-202ENST00000539176 OR8G2PQ6IF36 304 aa20.75■□□□□ 0.91
KLHL42-202ENST00000539176 TAF15Q92804 592 aaKnown RBP eCLIP20.75■□□□□ 0.91
KLHL42-202ENST00000539176 ZDHHC16Q969W1 377 aa20.75■□□□□ 0.91
KLHL42-202ENST00000539176 BPESC1Q9GZL8 116 aa20.75■□□□□ 0.91
KLHL42-202ENST00000539176 TMEM140Q9NV12 185 aa20.75■□□□□ 0.91
KLHL42-202ENST00000539176 RFNGQ9Y644 331 aa20.75■□□□□ 0.91
KLHL42-202ENST00000539176 IFNA17P01571 189 aa20.74■□□□□ 0.91
KLHL42-202ENST00000539176 TAGLNQ01995 201 aaKnown RBP20.74■□□□□ 0.91
KLHL42-202ENST00000539176 SPSB3Q6PJ21 355 aa20.74■□□□□ 0.91
KLHL42-202ENST00000539176 C8orf31Q8N9H6 132 aa20.74■□□□□ 0.91
KLHL42-202ENST00000539176 FBN2P35556 2912 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 PMS2P5A8MQ11 134 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 GNG10P50151 68 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 DLX6P56179 175 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 GNB2P62879 340 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 UBE2L5PA0A1B0GUS4 154 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 DNASE2O00115 360 aaPredicted RBP20.73■□□□□ 0.91
KLHL42-202ENST00000539176 HRASP01112 189 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 ARG1P05089 322 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 ATP5J2P56134 94 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 RELBQ01201 579 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 VWC2Q2TAL6 325 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 ZNF787Q6DD87 383 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 C1orf229Q6ZS94 237 aaPredicted RBP20.73■□□□□ 0.91
KLHL42-202ENST00000539176 CENPVQ7Z7K6 275 aaPredicted RBP20.73■□□□□ 0.91
KLHL42-202ENST00000539176 ZNF383Q8NA42 475 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 PERPQ96FX8 193 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 RSG1Q9BU20 258 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 ZNRD1Q9P1U0 126 aa20.73■□□□□ 0.91
KLHL42-202ENST00000539176 C22orf46C9J442 243 aa20.72■□□□□ 0.91
KLHL42-202ENST00000539176 C9JQL5 133 aa20.72■□□□□ 0.91
KLHL42-202ENST00000539176 PPT1P50897 306 aa20.72■□□□□ 0.91
KLHL42-202ENST00000539176 OR2B8PP59922 312 aa20.72■□□□□ 0.91
KLHL42-202ENST00000539176 RTL8BQ17RB0 113 aa20.72■□□□□ 0.91
KLHL42-202ENST00000539176 SSX9Q7RTT3 188 aa20.72■□□□□ 0.91
KLHL42-202ENST00000539176 AIFM2Q9BRQ8 373 aa20.72■□□□□ 0.91
KLHL42-202ENST00000539176 TRBV23-1A0A0A0MS06 115 aa20.71■□□□□ 0.91
KLHL42-202ENST00000539176 C15orf61A6NNL5 157 aa20.71■□□□□ 0.91
KLHL42-202ENST00000539176 PDLIM4P50479 330 aa20.71■□□□□ 0.91
KLHL42-202ENST00000539176 DLX1P56177 255 aa20.71■□□□□ 0.91
KLHL42-202ENST00000539176 FAM71F2Q6NXP2 309 aa20.71■□□□□ 0.91
KLHL42-202ENST00000539176 ZNF833PQ6ZTB9 187 aa20.71■□□□□ 0.91
KLHL42-202ENST00000539176 RHOVQ96L33 236 aa20.71■□□□□ 0.91
KLHL42-202ENST00000539176 PRB3Q04118 309 aaPredicted RBP20.71■□□□□ 0.91
KLHL42-202ENST00000539176 SLC35B3Q9H1N7 401 aa20.71■□□□□ 0.91
KLHL42-202ENST00000539176 FOXA2Q9Y261 457 aaPredicted RBP20.71■□□□□ 0.91
KLHL42-202ENST00000539176 GPR37O15354 613 aa20.7■□□□□ 0.9
KLHL42-202ENST00000539176 SSBP3Q9BWW4 388 aaPredicted RBP20.7■□□□□ 0.9
KLHL42-202ENST00000539176 TMEM41BQ5BJD5 291 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 C11orf42Q8N5U0 333 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 LINC00311Q8N616 119 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 SFT2D1Q8WV19 159 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 PSMG3-AS1Q96PY0 264 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 HELZ2Q9BYK8 2649 aaKnown RBP20.69■□□□□ 0.9
KLHL42-202ENST00000539176 PPIAL4CA0A0B4J2A2 164 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 RBFOX3A6NFN3 312 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 C15orf62A8K5M9 175 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 TSPAN4O14817 238 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 PPIAL4GP0DN37 164 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 ZNF596Q8TC21 504 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 UNKLQ9H9P5 680 aaKnown RBP20.69■□□□□ 0.9
KLHL42-202ENST00000539176 RPRMQ9NS64 109 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 TMEM14BQ9NUH8 114 aa20.69■□□□□ 0.9
KLHL42-202ENST00000539176 IGHV2-5P01817 119 aa20.68■□□□□ 0.9
KLHL42-202ENST00000539176 VDAC2P45880 294 aaPredicted RBP20.68■□□□□ 0.9
KLHL42-202ENST00000539176 OR4A47Q6IF82 309 aa20.68■□□□□ 0.9
KLHL42-202ENST00000539176 VKORC1L1Q8N0U8 176 aa20.68■□□□□ 0.9
KLHL42-202ENST00000539176 CLDND2Q8NHS1 167 aa20.68■□□□□ 0.9
KLHL42-202ENST00000539176 MBD3L1Q8WWY6 194 aa20.68■□□□□ 0.9
KLHL42-202ENST00000539176 GGACTQ9BVM4 153 aa20.68■□□□□ 0.9
KLHL42-202ENST00000539176 SLC35D1Q9NTN3 355 aa20.68■□□□□ 0.9
KLHL42-202ENST00000539176 CELSR2Q9HCU4 2923 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms