RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 CXorf67Q86X51 503 aaPredicted RBP8.96□□□□□ -0.98
RTN3-208ENST00000537981 NHLRC2Q8NBF2 726 aa8.96□□□□□ -0.98
RTN3-208ENST00000537981 OR10W1Q8NGF6 305 aa8.96□□□□□ -0.98
RTN3-208ENST00000537981 UBALD1Q8TB05 177 aa8.96□□□□□ -0.98
RTN3-208ENST00000537981 RAB40CQ96S21 281 aa8.96□□□□□ -0.98
RTN3-208ENST00000537981 PMCHL2Q9BQD1 86 aa8.96□□□□□ -0.98
RTN3-208ENST00000537981 PHPT1Q9NRX4 125 aaPredicted RBP8.96□□□□□ -0.98
RTN3-208ENST00000537981 SLC17A4Q9Y2C5 497 aa8.96□□□□□ -0.98
RTN3-208ENST00000537981 EXPH5Q8NEV8 1989 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 EDDM13A0A1B0GTR0 161 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 PDCD6O75340 191 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 OR7C1O76099 320 aaPredicted RBP8.95□□□□□ -0.98
RTN3-208ENST00000537981 SHISA2Q6UWI4 295 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 C18orf32Q8TCD1 76 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 SRSF8Q9BRL6 282 aaKnown RBP8.95□□□□□ -0.98
RTN3-208ENST00000537981 MRPL13Q9BYD1 178 aaKnown RBP8.95□□□□□ -0.98
RTN3-208ENST00000537981 MOB1AQ9H8S9 216 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 V9GYV3 84 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 DCHS1Q96JQ0 3298 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 ADH5P11766 374 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 CD24P25063 80 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 GDF1P27539 372 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 HBG1P69891 147 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 HBG2P69892 147 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 IL11RAQ14626 422 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 SPATA46Q5T0L3 261 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 WDR82Q6UXN9 313 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 TCF24Q7RTU0 167 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 NEGR1Q7Z3B1 354 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 DOLPP1Q86YN1 238 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 FGF14Q92915 247 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 CDX2Q99626 313 aaPredicted RBP8.95□□□□□ -0.98
RTN3-208ENST00000537981 VCX2Q9H322 139 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 ZNF835Q9Y2P0 537 aa8.95□□□□□ -0.98
RTN3-208ENST00000537981 CFAP47Q6ZTR5 3102 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 OR4C46A6NHA9 309 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 CLDN1O95832 211 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 TNFP01375 233 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 IGLV3-1P01715 115 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 LINC00271P0C7V0 271 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 TCTAP57738 103 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 CLRN1P58418 232 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 ZXDAP98168 799 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 TBR1Q16650 682 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 OR2Z1Q8NG97 314 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 OR8B3Q8NGG8 313 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 GUCD1Q96NT3 240 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 OR8B2Q96RD0 313 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 NPCDR1Q9BY65 106 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 YTHDF2Q9Y5A9 579 aaKnown RBP8.94□□□□□ -0.98
RTN3-208ENST00000537981 TEX48A0A1B0GUV7 120 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 M0R2Z0 102 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 EFNA2O43921 213 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 SCGB2A1O75556 95 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 GATA3P23771 443 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 F2RP25116 425 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 RHOBP62745 196 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 KIR2DS3Q14952 304 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 OR10J3Q5JRS4 329 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 C20orf204Q6ZNR8 217 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 Q8N7P7 452 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 CITED1Q99966 193 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 HILPDAQ9Y5L2 63 aa8.94□□□□□ -0.98
RTN3-208ENST00000537981 PRSS38A1L453 326 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 H0Y980 276 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 H3BUT2 72 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 UBE2G1P62253 170 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 RPEL1Q2QD12 228 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 OSR2Q8N2R0 312 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 GNB1LQ9BYB4 327 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 PEF1Q9UBV8 284 aaKnown RBP8.93□□□□□ -0.98
RTN3-208ENST00000537981 CD300LBA8K4G0 201 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 CD5LO43866 347 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 MT-CO2P00403 227 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 ARL14EPLP0DKL9 152 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 CCNOP22674 350 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 PTGDSP41222 190 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 EDDM3BP56851 147 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 RPL31P62899 125 aaKnown RBP8.93□□□□□ -0.98
RTN3-208ENST00000537981 RPL8P62917 257 aaKnown RBP8.93□□□□□ -0.98
RTN3-208ENST00000537981 IGLV3-21P80748 117 aaPredicted RBP8.93□□□□□ -0.98
RTN3-208ENST00000537981 CEACAM21Q3KPI0 293 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 RNASEKQ6P5S7 137 aaKnown RBP8.93□□□□□ -0.98
RTN3-208ENST00000537981 ZNF788Q6ZQV5 615 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 C19orf35Q6ZS72 473 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 URB1-AS1Q96HZ7 61 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 HRASLS2Q9NWW9 162 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 CLCF1Q9UBD9 225 aa8.93□□□□□ -0.98
RTN3-208ENST00000537981 KNTC1P50748 2209 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 A0A1W2PNR3 127 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 FBLL1A6NHQ2 334 aaKnown RBP8.92□□□□□ -0.98
RTN3-208ENST00000537981 DEGS1O15121 323 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 PDE6DO43924 150 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 GDF5OSQ5U4N7 250 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 CCDC144NLQ6NUI1 221 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 OR2T6Q8NHC8 308 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 SLC25A40Q8TBP6 338 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 RAB37Q96AX2 223 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 MMABQ96EY8 250 aaPredicted RBP8.92□□□□□ -0.98
RTN3-208ENST00000537981 SSBP4Q9BWG4 385 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms