RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 TRAV1-1A0A0B4J248 108 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 TRAV40A0A0B4J280 105 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 CENPVL3A0A0U1RRI6 287 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 FAM90A26D6RGX4 464 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 SIRPB1O00241 398 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 WRBO00258 174 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 SLC33A1O00400 549 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-206ENST00000537925 HSD17B6O14756 317 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 MGST3O14880 152 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 CRYBA1P05813 215 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 OR8U8P0C7N1 319 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 NFYBP25208 207 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 OR3A1P47881 315 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 RAB5BP61020 215 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 RPL23AP62750 156 aaKnown RBP9.38□□□□□ -0.91
SNHG1-206ENST00000537925 CLINT1Q14677 625 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 CXorf66Q5JRM2 361 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-206ENST00000537925 TMEM200BQ69YZ2 307 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 TMEM182Q6ZP80 229 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-206ENST00000537925 C9orf139Q6ZV77 190 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 VMO1Q7Z5L0 202 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 STX12Q86Y82 276 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 ODF3L1Q8IXM7 274 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 ZBTB34Q8NCN2 500 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 OR2G3Q8NGZ4 309 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 PPP1R35Q8TAP8 253 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 FAM213BQ8TBF2 198 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 RBMXL1Q96E39 390 aaKnown RBP9.38□□□□□ -0.91
SNHG1-206ENST00000537925 MALSU1Q96EH3 234 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 EIF5A2Q9GZV4 153 aaKnown RBP9.38□□□□□ -0.91
SNHG1-206ENST00000537925 TOLLIPQ9H0E2 274 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 LIN7CQ9NUP9 197 aaKnown RBP9.38□□□□□ -0.91
SNHG1-206ENST00000537925 MMP24Q9Y5R2 645 aa9.38□□□□□ -0.91
SNHG1-206ENST00000537925 FBN1P35555 2871 aaKnown RBP9.37□□□□□ -0.91
SNHG1-206ENST00000537925 RNF212BA8MTL3 300 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 TXNL1O43396 289 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 SERPINE2P07093 398 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 ZNF44P15621 663 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 SULT1A1P50225 295 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 DYNLT3P51808 116 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 PAX9P55771 341 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 EDDM3BP56851 147 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 BPIFB3P59826 476 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 RAB2AP61019 212 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 MEF2CQ06413 473 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-206ENST00000537925 AWAT1Q58HT5 328 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 C11orf42Q8N5U0 333 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 OR10G4Q8NGN3 311 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 OR5C1Q8NGR4 320 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 C22orf15Q8WYQ4 148 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 TNFRSF14Q92956 283 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 COA4Q9NYJ1 87 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 RNF150Q9ULK6 438 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 COL6A5A8TX70 2615 aa9.37□□□□□ -0.91
SNHG1-206ENST00000537925 IGHV3OR16-10A0A075B7F0 116 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 A0A1W2PPH5 198 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 C7orf77A4D0Y5 90 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 CHST1O43916 411 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 TMEM50AO95807 157 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 PRTN3P24158 256 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 DLX6P56179 175 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 EDDM3AQ14507 147 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 SPSB3Q6PJ21 355 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 TCF23Q7RTU1 214 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 BCL6BQ8N143 479 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-206ENST00000537925 FAM216AQ8WUB2 273 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 LHX4Q969G2 390 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 HIST1H2BAQ96A08 127 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 GPR146Q96CH1 333 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 PSMG3Q9BT73 122 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-206ENST00000537925 SAV1Q9H4B6 383 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-206ENST00000537925 SIRT7Q9NRC8 400 aa9.36□□□□□ -0.91
SNHG1-206ENST00000537925 IGHV1-69DA0A0B4J2H0 117 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 hADV38S2A0JD32 116 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 RBFOX3A6NFN3 312 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 C1orf196B1AJZ1 125 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 HSPB6O14558 160 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 TCF21O43680 179 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 NDUFS6O75380 124 aaKnown RBP9.35□□□□□ -0.91
SNHG1-206ENST00000537925 IGLV2-14P01704 120 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 IGHV1-69P01742 117 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 HSPB1P04792 205 aaKnown RBP9.35□□□□□ -0.91
SNHG1-206ENST00000537925 CCL3L1P16619 93 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 PPP1CCP36873 323 aaKnown RBP9.35□□□□□ -0.91
SNHG1-206ENST00000537925 FHITP49789 147 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 DLX1P56177 255 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 AESQ08117 197 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 ZNF506Q5JVG8 444 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 AKR1C8PQ5T2L2 129 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 BRD3OSQ6XYD6 125 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 TCTEX1D1Q8N7M0 179 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 TPRX1Q8N7U7 411 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 ZNF418Q8TF45 676 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-206ENST00000537925 COQ2Q96H96 371 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 RPS10P5Q9NQ39 176 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 SOX21Q9Y651 276 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-206ENST00000537925 LINC00312Q9Y6C7 94 aa9.35□□□□□ -0.91
SNHG1-206ENST00000537925 A0A087WWC5 75 aa9.34□□□□□ -0.91
SNHG1-206ENST00000537925 C17orf98A8MV24 154 aa9.34□□□□□ -0.91
SNHG1-206ENST00000537925 IFNA5P01569 189 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms