RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 MYOD1P15172 320 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 CTRB1P17538 263 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 LOXP28300 417 aaPredicted RBP14.29□□□□□ -0.12
SNX17-210ENST00000537606 THBS3P49746 956 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 PRB3Q04118 309 aaPredicted RBP14.29□□□□□ -0.12
SNX17-210ENST00000537606 TFF3Q07654 80 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 ZNF787Q6DD87 383 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 CTRB2Q6GPI1 263 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 DPPA3Q6W0C5 159 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 C2CD4CQ8TF44 421 aa14.29□□□□□ -0.12
SNX17-210ENST00000537606 PSMG3Q9BT73 122 aaPredicted RBP14.29□□□□□ -0.12
SNX17-210ENST00000537606 SAV1Q9H4B6 383 aaPredicted RBP14.29□□□□□ -0.12
SNX17-210ENST00000537606 MALRD1Q5VYJ5 2156 aa14.28□□□□□ -0.12
SNX17-210ENST00000537606 CACNA1AO00555 2505 aa14.28□□□□□ -0.12
SNX17-210ENST00000537606 DLX1P56177 255 aa14.28□□□□□ -0.12
SNX17-210ENST00000537606 ZNF506Q5JVG8 444 aa14.28□□□□□ -0.12
SNX17-210ENST00000537606 HEPN1Q6WQI6 88 aa14.28□□□□□ -0.12
SNX17-210ENST00000537606 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.28□□□□□ -0.12
SNX17-210ENST00000537606 OR10P1Q8NGE3 313 aa14.28□□□□□ -0.12
SNX17-210ENST00000537606 TNCP24821 2201 aa14.28□□□□□ -0.12
SNX17-210ENST00000537606 A0A1W2PPH5 198 aa14.27□□□□□ -0.12
SNX17-210ENST00000537606 HBE1P02100 147 aa14.27□□□□□ -0.12
SNX17-210ENST00000537606 DEFA4P12838 97 aa14.27□□□□□ -0.12
SNX17-210ENST00000537606 OR4A47Q6IF82 309 aa14.27□□□□□ -0.12
SNX17-210ENST00000537606 ACSM6Q6P461 480 aa14.27□□□□□ -0.12
SNX17-210ENST00000537606 CIB3Q96Q77 187 aaPredicted RBP14.27□□□□□ -0.12
SNX17-210ENST00000537606 KIR2DS2P43631 304 aa14.27□□□□□ -0.13
SNX17-210ENST00000537606 DIAPH2-AS1Q14236 149 aa14.27□□□□□ -0.13
SNX17-210ENST00000537606 AVPI1Q5T686 147 aa14.27□□□□□ -0.13
SNX17-210ENST00000537606 RPP25LQ8N5L8 163 aaKnown RBP14.27□□□□□ -0.13
SNX17-210ENST00000537606 C15orf62A8K5M9 175 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 OR8U8P0C7N1 319 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 FGF7P21781 194 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 FLI1Q01543 452 aaPredicted RBP14.26□□□□□ -0.13
SNX17-210ENST00000537606 ABHD12Q8N2K0 398 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 HIST1H2BAQ96A08 127 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 HEYLQ9NQ87 328 aaPredicted RBP14.26□□□□□ -0.13
SNX17-210ENST00000537606 LOC102723971A0A1B0GUV8 181 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 SRRM4A7MD48 611 aaKnown RBP14.26□□□□□ -0.13
SNX17-210ENST00000537606 H3BQ15 152 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 IFNA10P01566 189 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 OPN1MWP04001 364 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 OPN1MW2P0DN77 364 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 OPN1MW3P0DN78 364 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 SPCS3P61009 180 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 SERF2P84101 59 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 TMEM41BQ5BJD5 291 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 TMEM147Q9BVK8 224 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 SLC35D1Q9NTN3 355 aa14.26□□□□□ -0.13
SNX17-210ENST00000537606 TRAV1-1A0A0B4J248 108 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 UQCRFS1P47985 274 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 MRPL20Q9BYC9 149 aaKnown RBP14.25□□□□□ -0.13
SNX17-210ENST00000537606 SMDT1Q9H4I9 107 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 KAAG1Q9UBP8 84 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 RRHO14718 337 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 HSPB1P04792 205 aaKnown RBP14.25□□□□□ -0.13
SNX17-210ENST00000537606 OR13D1Q8NGV5 346 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 MBD3L1Q8WWY6 194 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 ADTRPQ96IZ2 230 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 HINT2Q9BX68 163 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 HIPK2Q9H2X6 1198 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 TMPRSS5Q9H3S3 457 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 SLC25A22Q9H936 323 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 TCF19Q9Y242 345 aa14.25□□□□□ -0.13
SNX17-210ENST00000537606 COL12A1Q99715 3063 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 MAP1LC3B2A6NCE7 125 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 ZNF727A8MUV8 499 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 ZNF429Q86V71 674 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 FAM24BQ8N5W8 94 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 OR10X1Q8NGY0 326 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 RAB39BQ96DA2 213 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 PARD6GQ9BYG4 376 aaPredicted RBP14.24□□□□□ -0.13
SNX17-210ENST00000537606 MAP1LC3BQ9GZQ8 125 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 ASH1LQ9NR48 2969 aaKnown RBP14.24□□□□□ -0.13
SNX17-210ENST00000537606 hCG_1809904A0A1W2PP81 198 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 A0A1W2PR64 198 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 A0A1W2PRV1 198 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 FAM90A9PA6NNJ1 464 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 RAB11AP62491 216 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 AARDQ4LEZ3 155 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 C15orf54Q8N8G6 183 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 TMEM204Q9BSN7 226 aa14.24□□□□□ -0.13
SNX17-210ENST00000537606 C15orf61A6NNL5 157 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 BCL2P10415 239 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 VDAC2P45880 294 aaPredicted RBP14.23□□□□□ -0.13
SNX17-210ENST00000537606 HOXA1P49639 335 aaPredicted RBP14.23□□□□□ -0.13
SNX17-210ENST00000537606 TMEM30BQ3MIR4 351 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 KHDC3LQ587J8 217 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 OR10A7Q8NGE5 316 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 PINX1Q96BK5 328 aaKnown RBP14.23□□□□□ -0.13
SNX17-210ENST00000537606 TSPAN9O75954 239 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 DLX6P56179 175 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 RHEBQ15382 184 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 TMEM155Q4W5P6 130 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 FFAR4Q5NUL3 377 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 ZNF833PQ6ZTB9 187 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 NPCDR1Q9BY65 106 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 SLC39A9Q9NUM3 307 aa14.23□□□□□ -0.13
SNX17-210ENST00000537606 SPTAN1Q13813 2472 aaKnown RBP14.22□□□□□ -0.13
SNX17-210ENST00000537606 J3QR06 171 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms