RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 PHF3Q92576 2039 aaKnown RBP6.51□□□□□ -1.37
CPSF7-216ENST00000536548 TRAV24A0A0B4J272 114 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 LRRC30A6NM36 301 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 J3QT63 122 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 HSPB6O14558 160 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 CXCL13O43927 109 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 YPEL1O60688 119 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 CXorf1O96002 111 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 P04436 131 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 IL6RP08887 468 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-216ENST00000536548 PATE4P0C8F1 98 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 IRF2P14316 349 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 BRS3P32247 399 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 PRSS12P56730 875 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 GNB1P62873 340 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 ZNF90Q03938 601 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 PLP2Q04941 152 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 Q0VFX4 171 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 IZUMO4Q1ZYL8 232 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 ARSJQ5FYB0 599 aaPredicted RBP6.51□□□□□ -1.37
CPSF7-216ENST00000536548 MRPL14Q6P1L8 145 aaKnown RBP6.51□□□□□ -1.37
CPSF7-216ENST00000536548 WDR73Q6P4I2 378 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 BATF2Q8N1L9 274 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 TMEM256Q8N2U0 113 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 FGFRL1Q8N441 504 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 WDR31Q8NA23 367 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 OR5T1Q8NG75 326 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 SGMS2Q8NHU3 365 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 DTD1Q8TEA8 209 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 IL1F10Q8WWZ1 152 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 RDH5Q92781 318 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 YPEL2Q96QA6 119 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 SAMD10Q9BYL1 202 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 SH2D2AQ9NP31 389 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 OR1A1Q9P1Q5 309 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 TRAPPC2LQ9UL33 140 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 WDR83OSQ9Y284 106 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 ZFP30Q9Y2G7 519 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 WIPI2Q9Y4P8 454 aa6.51□□□□□ -1.37
CPSF7-216ENST00000536548 ANK3Q12955 4377 aaKnown RBP6.5□□□□□ -1.37
CPSF7-216ENST00000536548 SAA2-SAA4A0A096LPE2 208 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 IGHV1-45A0A0A0MS14 117 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 PMS2P5A8MQ11 134 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 FAM166BA8MTA8 275 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 C21orf140B9A014 251 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 HMGB3O15347 200 aaKnown RBP6.5□□□□□ -1.37
CPSF7-216ENST00000536548 SYNGR1O43759 233 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 CLDN14O95500 239 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 IGHEP01854 428 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 REG1AP05451 166 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 RAB7AP51149 207 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 MLF1P58340 268 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 B3GALT5-AS1P59052 145 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 SUMO1P63165 101 aaKnown RBP6.5□□□□□ -1.37
CPSF7-216ENST00000536548 MRPS11P82912 194 aaKnown RBP6.5□□□□□ -1.37
CPSF7-216ENST00000536548 PMP22Q01453 160 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 TGFBR3Q03167 851 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 RPEL1Q2QD12 228 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 TPTE2P1Q5T6R2 138 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 ZNF497Q6ZNH5 498 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 BAGE3Q86Y29 109 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 BAGE2Q86Y30 109 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 DRAM1Q8N682 238 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 KLHDC1Q8N7A1 406 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 ZNF645Q8N7E2 425 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 SIGLECL1Q8N7X8 197 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 OR1K1Q8NGR3 316 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 OR10D3Q8NH80 312 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 FGFBP3Q8TAT2 258 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 GATAD1Q8WUU5 269 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 THOC3Q96J01 351 aaKnown RBP6.5□□□□□ -1.37
CPSF7-216ENST00000536548 IMMP1LQ96LU5 166 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 WFIKKN1Q96NZ8 548 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 UHRF2Q96PU4 802 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 RNF2Q99496 336 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 HSPB9Q9BQS6 159 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 RTL8AQ9BWD3 113 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 FGF23Q9GZV9 251 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-216ENST00000536548 MRPL18Q9H0U6 180 aaKnown RBP6.5□□□□□ -1.37
CPSF7-216ENST00000536548 OPN3Q9H1Y3 402 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-216ENST00000536548 ZNF703Q9H7S9 590 aaPredicted RBP6.5□□□□□ -1.37
CPSF7-216ENST00000536548 PROK2Q9HC23 129 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 UQCR10Q9UDW1 63 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 POLDIP2Q9Y2S7 368 aa6.5□□□□□ -1.37
CPSF7-216ENST00000536548 AKAP6Q13023 2319 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 IGKV3D-15A0A087WSY6 115 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 TRAV39A0A0B4J263 110 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 TMEM30CPA0ZSE6 113 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 ODAMA1E959 279 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 FAM90A9PA6NNJ1 464 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 C9JCJ5 164 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 WIPF1O43516 503 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 WDR1O75083 606 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 SS18L1O75177 396 aaPredicted RBP6.49□□□□□ -1.37
CPSF7-216ENST00000536548 MRPL33O75394 65 aaKnown RBP6.49□□□□□ -1.37
CPSF7-216ENST00000536548 NDUFB4O95168 129 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 IGLV2-14P01704 120 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 NPSP0C0P6 89 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 P0C879 139 aa6.49□□□□□ -1.37
CPSF7-216ENST00000536548 CCNOP22674 350 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms