RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 SAMD12Q8N8I0 201 aa9.61□□□□□ -0.87
PRKDC-207ENST00000536483 CTDSPLO15194 276 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 RBFOX2O43251 390 aaKnown RBP eCLIP9.6□□□□□ -0.87
PRKDC-207ENST00000536483 LY86O95711 162 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 CRYZL1O95825 349 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 PPYP01298 95 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 LGALS1P09382 135 aaKnown RBP9.6□□□□□ -0.87
PRKDC-207ENST00000536483 TRAPPC2P0DI81 140 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 TRAPPC2BP0DI82 140 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 AADACP22760 399 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 FCGR2CP31995 323 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 INSL3P51460 131 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 TAS2R20P59543 309 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 ARPC4P59998 168 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 CDK10Q15131 360 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 TRIQKQ629K1 86 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 KCTD9Q7L273 389 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 OR1N2Q8NGR9 330 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 CLCC1Q96S66 551 aa9.6□□□□□ -0.87
PRKDC-207ENST00000536483 FAM103A1Q9BTL3 118 aaKnown RBP9.6□□□□□ -0.87
PRKDC-207ENST00000536483 MRPS7Q9Y2R9 242 aaKnown RBP9.6□□□□□ -0.87
PRKDC-207ENST00000536483 SORL1Q92673 2214 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 FAM25AB3EWG3 89 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 FAM25CB3EWG5 89 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 FAM25GB3EWG6 89 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 CREBL2O60519 120 aaPredicted RBP9.59□□□□□ -0.87
PRKDC-207ENST00000536483 HPGDSO60760 199 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 FGF2P09038 288 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 PTHLHP12272 177 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 PRSS3P35030 304 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 KIR2DS2P43631 304 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 GNB1P62873 340 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 DYRK1AQ13627 763 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 BAK1Q16611 211 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 KLK9Q2XQG4 91 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 TMEM69Q5SWH9 247 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 PUSL1Q8N0Z8 303 aaKnown RBP9.59□□□□□ -0.87
PRKDC-207ENST00000536483 CADM3Q8N126 398 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 Q8N402 240 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 OR4S2Q8NH73 311 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 GPX8Q8TED1 209 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 DEDD2Q8WXF8 326 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 OR5B12Q96R08 314 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 NEURL2Q9BR09 285 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 C7orf50Q9BRJ6 194 aaKnown RBP9.59□□□□□ -0.87
PRKDC-207ENST00000536483 SCPEP1Q9HB40 452 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 KLK9Q9UKQ9 250 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 TBC1D24Q9ULP9 559 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 SMAD5-AS1Q9Y6J3 95 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 EPPK1P58107 5090 aaKnown RBP9.59□□□□□ -0.87
PRKDC-207ENST00000536483 TENM2Q9NT68 2774 aa9.59□□□□□ -0.87
PRKDC-207ENST00000536483 A0A0G2JLM5 398 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 FCGR3BO75015 233 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 CNIH1O95406 144 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 HSPB1P04792 205 aaKnown RBP9.58□□□□□ -0.88
PRKDC-207ENST00000536483 EIF4EP06730 217 aaKnown RBP9.58□□□□□ -0.88
PRKDC-207ENST00000536483 IL6RP08887 468 aaPredicted RBP9.58□□□□□ -0.88
PRKDC-207ENST00000536483 SAA1P0DJI8 122 aaPredicted RBP9.58□□□□□ -0.88
PRKDC-207ENST00000536483 INPP1P49441 399 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 MRPS10P82664 201 aaKnown RBP9.58□□□□□ -0.88
PRKDC-207ENST00000536483 IL18Q14116 193 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 POU2AF1Q16633 256 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 CASC10Q5T4H9 136 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 SBSPONQ8IVN8 264 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 MMD2Q8IY49 270 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 DUSP18Q8NEJ0 188 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 GRPEL2Q8TAA5 225 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 VSTM2AQ8TAG5 236 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 MUC7Q8TAX7 377 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 TMEM167AQ8TBQ9 72 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 TINAGL1Q9GZM7 467 aaPredicted RBP9.58□□□□□ -0.88
PRKDC-207ENST00000536483 ZNF430Q9H8G1 570 aaPredicted RBP9.58□□□□□ -0.88
PRKDC-207ENST00000536483 CCL28Q9NRJ3 127 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 EXTL2Q9UBQ6 330 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 TNCP24821 2201 aa9.58□□□□□ -0.88
PRKDC-207ENST00000536483 TRBV9A0A0B4J1U6 114 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 MSGN1A6NI15 193 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 LINC01619G3V211 115 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 SULT1C2O00338 296 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 GSTZ1O43708 216 aaPredicted RBP9.57□□□□□ -0.88
PRKDC-207ENST00000536483 ELK1P19419 428 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 GNRHRP30968 328 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 MAS1LP35410 378 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 TAS2R46P59540 309 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 SNX29P2Q8IUI4 249 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 ADAD2Q8NCV1 583 aaKnown RBP9.57□□□□□ -0.88
PRKDC-207ENST00000536483 ABHD5Q8WTS1 349 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 SRSF12Q8WXF0 261 aaKnown RBP9.57□□□□□ -0.88
PRKDC-207ENST00000536483 MOB3AQ96BX8 217 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 USMG5Q96IX5 58 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 RCHY1Q96PM5 261 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 SPIN2AQ99865 258 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 SPIN2BQ9BPZ2 258 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 AIFM2Q9BRQ8 373 aa9.57□□□□□ -0.88
PRKDC-207ENST00000536483 CENPXA8MT69 81 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 KBTBD11O94819 623 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 OR2A4O95047 310 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 HRASP01112 189 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 TRGV3P03979 118 aa9.56□□□□□ -0.88
PRKDC-207ENST00000536483 OR9G9P0C7N8 305 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms