RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 VCX3AQ9NNX9 186 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 IFT46Q9NQC8 304 aa10.9□□□□□ -0.66
RTN3P1-201ENST00000536295 TNCP24821 2201 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 A0A087WXM4 84 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 BMPR1BO00238 502 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 SULT1C2O00338 296 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 XRCC3O43542 346 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 HRASP01112 189 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 CSN3P07498 182 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 IL6RP08887 468 aaPredicted RBP10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 MYOD1P15172 320 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 C15orf32Q32M92 178 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 UBE2NLQ5JXB2 153 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 SLC25A42Q86VD7 318 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 CROCCP3Q8IVE0 287 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 SAMD12Q8N8I0 201 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 NECAP1Q8NC96 275 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 OR5AP2Q8NGF4 316 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 S100A16Q96FQ6 103 aaKnown RBP10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 RCHY1Q96PM5 261 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 HRASLSQ9HDD0 168 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 ZNF257Q9Y2Q1 563 aa10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 HUWE1Q7Z6Z7 4374 aaKnown RBP10.89□□□□□ -0.67
RTN3P1-201ENST00000536295 A0A1B0GW64 132 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 PPP5D1E7EU14 171 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 H0Y980 276 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 TMEM127O75204 238 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 IGHV3-23P01764 117 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 IGHV4-30-4P0DP06 118 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 AREGP15514 252 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 MAS1LP35410 378 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 HERV-K104P61576 105 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 RPL8P62917 257 aaKnown RBP10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 MSMO1Q15800 293 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 TMEM69Q5SWH9 247 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 OR4A47Q6IF82 309 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 ZNF818PQ6ZRF7 136 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 SGPP2Q8IWX5 399 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 Q8N1Y9 231 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 ZBTB34Q8NCN2 500 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 OR51H1Q8NH63 302 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 SLC2A9Q9NRM0 540 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 EHFQ9NZC4 300 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 FBXL7Q9UJT9 491 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 S4R3C0 116 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 TENM3Q9P273 2699 aa10.88□□□□□ -0.67
RTN3P1-201ENST00000536295 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 NPIPB5A8MRT5 1133 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 TNFAIP8O95379 198 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 HLA-AP01891 365 aaKnown RBP10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 REG1AP05451 166 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 ZNF735P0CB33 412 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 HLA-GP17693 338 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 RFX2P48378 723 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 TAS2R20P59543 309 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 CATR1Q13166 79 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 AADACL3Q5VUY0 350 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 GIMAP1Q8WWP7 306 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 ZMAT4Q9H898 229 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 PEMTQ9UBM1 199 aa10.87□□□□□ -0.67
RTN3P1-201ENST00000536295 IZUMO1RA6ND01 250 aa10.86□□□□□ -0.67
RTN3P1-201ENST00000536295 NDUFB8O95169 186 aa10.86□□□□□ -0.67
RTN3P1-201ENST00000536295 PMP2P02689 132 aa10.86□□□□□ -0.67
RTN3P1-201ENST00000536295 RPA2P15927 270 aa10.86□□□□□ -0.67
RTN3P1-201ENST00000536295 PSMB6P28072 239 aa10.86□□□□□ -0.67
RTN3P1-201ENST00000536295 LCN12Q6JVE5 192 aa10.86□□□□□ -0.67
RTN3P1-201ENST00000536295 Q8N402 240 aa10.86□□□□□ -0.67
RTN3P1-201ENST00000536295 OR4A5Q8NH83 315 aa10.86□□□□□ -0.67
RTN3P1-201ENST00000536295 AIFM2Q9BRQ8 373 aa10.86□□□□□ -0.67
RTN3P1-201ENST00000536295 ZNF2Q9BSG1 426 aaPredicted RBP10.86□□□□□ -0.67
RTN3P1-201ENST00000536295 BET1LQ9NYM9 111 aa10.86□□□□□ -0.67
RTN3P1-201ENST00000536295 RYR3Q15413 4870 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 NBEAL2Q6ZNJ1 2754 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 TRAV3A0A0B4J244 114 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 RBFOX2O43251 390 aaKnown RBP eCLIP10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 S1PR2O95136 353 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 OR2C1O95371 312 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 DHFRP00374 187 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 HPRT1P00492 218 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 DEFA4P12838 97 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 NQO2P16083 231 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 GNRHRP30968 328 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 TAS2R31P59538 309 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 NCS1P62166 190 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 GTSCR1Q86UQ5 136 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 DMBX1Q8NFW5 382 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 OR5H2Q8NGV7 314 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 FANCD2OSQ96PS1 177 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 SIGLEC8Q9NYZ4 499 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 COMMD3Q9UBI1 195 aa10.85□□□□□ -0.67
RTN3P1-201ENST00000536295 CGB1A6NKQ9 187 aa10.84□□□□□ -0.67
RTN3P1-201ENST00000536295 UPK2O00526 184 aa10.84□□□□□ -0.67
RTN3P1-201ENST00000536295 GGCTO75223 188 aaKnown RBP10.84□□□□□ -0.67
RTN3P1-201ENST00000536295 RLN1P04808 185 aa10.84□□□□□ -0.67
RTN3P1-201ENST00000536295 EIF4EP06730 217 aaKnown RBP10.84□□□□□ -0.67
RTN3P1-201ENST00000536295 CRYGCP07315 174 aa10.84□□□□□ -0.67
RTN3P1-201ENST00000536295 CTRB1P17538 263 aa10.84□□□□□ -0.67
RTN3P1-201ENST00000536295 EDN2P20800 178 aa10.84□□□□□ -0.67
RTN3P1-201ENST00000536295 PRSS3P35030 304 aa10.84□□□□□ -0.67
RTN3P1-201ENST00000536295 ARL3P36405 182 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms