RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 OR13C6PQ8NH95 151 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 CLDND2Q8NHS1 167 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 PPTC7Q8NI37 304 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 VSTM2AQ8TAG5 236 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 FAM213BQ8TBF2 198 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 PLPPR1Q8TBJ4 325 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 C2orf15Q8WU43 125 aaKnown RBP2.03□□□□□ -2.08
SKA3-207ENST00000536239 NEIL2Q969S2 332 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 SMIM19Q96E16 107 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 ADTRPQ96IZ2 230 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 PGLYRP3Q96LB9 341 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 OXGR1Q96P68 337 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 LMF2Q9BU23 707 aaKnown RBP2.03□□□□□ -2.08
SKA3-207ENST00000536239 ST6GALNAC5Q9BVH7 336 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 GGTLC1Q9BX51 225 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 GPR174Q9BXC1 333 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 MAP1LC3CQ9BXW4 147 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 SMIM3Q9BZL3 60 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 COA1Q9GZY4 146 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 CST11Q9H112 138 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 ISG20L2Q9H9L3 353 aaKnown RBP2.03□□□□□ -2.08
SKA3-207ENST00000536239 GPR84Q9NQS5 396 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 CISHQ9NSE2 258 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 C20orf141Q9NUB4 165 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 PIGVQ9NUD9 493 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 BEX4Q9NWD9 120 aaPredicted RBP2.03□□□□□ -2.08
SKA3-207ENST00000536239 SIGLEC8Q9NYZ4 499 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 ZNF581Q9P0T4 197 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 OR5V1Q9UGF6 321 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 SLC2A6Q9UGQ3 507 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 WASHC3Q9Y3C0 194 aa2.03□□□□□ -2.08
SKA3-207ENST00000536239 PLXNA1Q9UIW2 1896 aa2.03□□□□□ -2.09
SKA3-207ENST00000536239 BRWD3Q6RI45 1802 aa2.03□□□□□ -2.09
SKA3-207ENST00000536239 ZNF236Q9UL36 1845 aa2.03□□□□□ -2.09
SKA3-207ENST00000536239 ABCA7Q8IZY2 2146 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 LCTP09848 1927 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 IGLV7-46A0A075B6I9 117 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 IGLV3-22A0A075B6J6 115 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TRBV9A0A0B4J1U6 114 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 A0A0G2JLM5 398 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 A0A0G2JNG1 304 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TRBV4-1A0A0J9YWV2 114 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 A0A1B0GUS0 222 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TEX48A0A1B0GUV7 120 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 A0A1B0GX51 115 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 DUXBA0A1W2PPF3 345 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 A0A1W2PPI3 338 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 C1orf226A1L170 272 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 FAM231BA6NCW3 169 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 MEIS3P1A6NDR6 274 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TMEM8BA6NDV4 472 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 CEACAM18A8MTB9 384 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 H0YJW9 148 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TMEM178BH3BS89 294 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 RER1O15258 196 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 HMGB3O15347 200 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 SLC31A1O15431 190 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 HCRTO43612 131 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 NUPR1O60356 82 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 SLC16A7O60669 478 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 DEDDO75618 318 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 CPSF4O95639 269 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 TNFP01375 233 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ORM1P02763 201 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 TTRP02766 147 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 CATP04040 527 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 WNT2P09544 360 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 FRMD6-AS1P0C7T7 363 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ZNF728P0DKX0 622 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 C8orf88P0DMB2 117 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 C8orf89P0DMQ9 161 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 CRISP2P16562 243 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ZNF17P17021 662 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 KLK2P20151 261 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ALOX5APP20292 161 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 CSRP1P21291 193 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 AADACP22760 399 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 EDNRAP25101 427 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 CD27P26842 260 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 CRYBB3P26998 211 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 NTSP30990 170 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ADRA1AP35348 466 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 PPP1CCP36873 323 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 TNFSF9P41273 254 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 UQCRFS1P47985 274 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 STC1P52823 247 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 SEC61GP60059 68 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 KRTDAPP60985 99 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 RPS28P62857 69 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 RPL8P62917 257 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 SLC35B1P78383 322 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 NTHL1P78549 312 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 EWSR1Q01844 656 aaKnown RBP eCLIP2.02□□□□□ -2.09
SKA3-207ENST00000536239 FUT5Q11128 374 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 KLRD1Q13241 179 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 KIR2DS5Q14953 304 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 RNPS1Q15287 305 aaKnown RBP2.02□□□□□ -2.09
SKA3-207ENST00000536239 OR1Q1Q15612 314 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 OR8B8Q15620 311 aa2.02□□□□□ -2.09
SKA3-207ENST00000536239 ZIC1Q15915 447 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms