RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 ZNF773Q6PK81 442 aa9.99□□□□□ -0.81
RTN3-207ENST00000536011 TMEM167AQ8TBQ9 72 aa9.99□□□□□ -0.81
RTN3-207ENST00000536011 DYNLRB2Q8TF09 96 aa9.99□□□□□ -0.81
RTN3-207ENST00000536011 SPATA2Q9UM82 520 aa9.99□□□□□ -0.81
RTN3-207ENST00000536011 IGKV1D-13A0A0B4J2D9 117 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 NPIPB5A8MRT5 1133 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 BMPR1BO00238 502 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 SSX5O60225 188 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 PRH1P02810 166 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 IGKV1-13P0DP09 117 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 SDC2P34741 201 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
RTN3-207ENST00000536011 RPL30P62888 115 aaKnown RBP9.98□□□□□ -0.81
RTN3-207ENST00000536011 ZNF45Q02386 682 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 C10orf55Q5SWW7 151 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 ZBTB34Q8NCN2 500 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 BEST4Q8NFU0 473 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 BORCS5Q969J3 196 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 DIABLOQ9NR28 239 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 SLC2A8Q9NY64 477 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 TAS2R8Q9NYW2 309 aa9.98□□□□□ -0.81
RTN3-207ENST00000536011 TRAV18A0A075B6X5 111 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 LOC100506127A0A0U1RQW1 187 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 GGCTO75223 188 aaKnown RBP9.97□□□□□ -0.81
RTN3-207ENST00000536011 RBMXL2O75526 392 aaKnown RBP9.97□□□□□ -0.81
RTN3-207ENST00000536011 OR2J3O76001 311 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 TPPPO94811 219 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 IGLV2-14P01704 120 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 HIST1H1BP16401 226 aaKnown RBP9.97□□□□□ -0.81
RTN3-207ENST00000536011 CBX5P45973 191 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 RPL8P62917 257 aaKnown RBP9.97□□□□□ -0.81
RTN3-207ENST00000536011 MXD1Q05195 221 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 CATR1Q13166 79 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 VKORC1L1Q8N0U8 176 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 PUSL1Q8N0Z8 303 aaKnown RBP9.97□□□□□ -0.81
RTN3-207ENST00000536011 MFSD4AQ8N468 514 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 OR13F1Q8NGS4 319 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 OR4A5Q8NH83 315 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 SECTM1Q8WVN6 248 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 FYTTD1Q96QD9 318 aaKnown RBP9.97□□□□□ -0.81
RTN3-207ENST00000536011 THAP7Q9BT49 309 aaPredicted RBP9.97□□□□□ -0.81
RTN3-207ENST00000536011 SLC2A9Q9NRM0 540 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 ADAM30Q9UKF2 790 aa9.97□□□□□ -0.81
RTN3-207ENST00000536011 TEX22C9J3V5 150 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 CYB5BO43169 146 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 RBFOX2O43251 390 aaKnown RBP eCLIP9.96□□□□□ -0.82
RTN3-207ENST00000536011 ZNF735P0CB33 412 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 DEFA4P12838 97 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 HLA-GP17693 338 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 FCGR2CP31995 323 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 CD81P60033 236 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 EIF4EBP1Q13541 118 aaPredicted RBP9.96□□□□□ -0.82
RTN3-207ENST00000536011 HAGHQ16775 308 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 TIMM50Q3ZCQ8 353 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 IDNKQ5T6J7 187 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 HOGA1Q86XE5 327 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 CROCCP3Q8IVE0 287 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 EEF1AKMT3Q96AZ1 226 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 TECRQ9NZ01 308 aaKnown RBP9.96□□□□□ -0.82
RTN3-207ENST00000536011 FBXL7Q9UJT9 491 aa9.96□□□□□ -0.82
RTN3-207ENST00000536011 HMX3A6NHT5 357 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 LGALS9O00182 355 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 PPYP01298 95 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 CRYGCP07315 174 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 PSMB6P28072 239 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 MECP2P51608 486 aaKnown RBP9.95□□□□□ -0.82
RTN3-207ENST00000536011 TAS2R31P59538 309 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 CD300EQ496F6 205 aaPredicted RBP9.95□□□□□ -0.82
RTN3-207ENST00000536011 FAM106AQ4KMX7 169 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 SPAG16Q8N0X2 631 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 CD300LFQ8TDQ1 290 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 SLC25A38Q96DW6 304 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 CXorf58Q96LI9 332 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 SLC5A7Q9GZV3 580 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 HRASLSQ9HDD0 168 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 BET1LQ9NYM9 111 aa9.95□□□□□ -0.82
RTN3-207ENST00000536011 DYNC2H1Q8NCM8 4307 aaKnown RBP9.95□□□□□ -0.82
RTN3-207ENST00000536011 LYSTQ99698 3801 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 CSMD3Q7Z407 3707 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 TRBV7-1A0A0A6YYK4 115 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 IZUMO1RA6ND01 250 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 C2orf70A6NJV1 201 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 PPP5D1E7EU14 171 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 J3QL48 77 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 TNFSF12O43508 249 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 IL6RP08887 468 aaPredicted RBP9.94□□□□□ -0.82
RTN3-207ENST00000536011 FGF2P09038 288 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 FOLR2P14207 255 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 NQO2P16083 231 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 ARL3P36405 182 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 HERV-K104P61576 105 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 NEDD8Q15843 81 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 OR4A47Q6IF82 309 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 SSX9Q7RTT3 188 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 GPHB5Q86YW7 130 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 NEURL2Q9BR09 285 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 SRSF8Q9BRL6 282 aaKnown RBP9.94□□□□□ -0.82
RTN3-207ENST00000536011 COMMD5Q9GZQ3 224 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 AUNIPQ9H7T9 357 aa9.94□□□□□ -0.82
RTN3-207ENST00000536011 EDA2RQ9HAV5 297 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms