RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 EXOSC2Q13868 293 aaKnown RBP8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 CNPY1Q3B7I2 92 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 TMEM203Q969S6 136 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 MARC2Q969Z3 335 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 MGLLQ99685 303 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 HSD17B10Q99714 261 aaKnown RBP8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 SRSF8Q9BRL6 282 aaKnown RBP8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 RBM38Q9H0Z9 239 aaKnown RBP8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 OR51E2Q9H255 320 aa8.41□□□□□ -1.06
CLSTN3-206ENST00000535668 TMEM213A2RRL7 107 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 METTL21EPA6NDL7 271 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 PDCD5O14737 125 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 RBFOX2O43251 390 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 RGS10O43665 173 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 HIST1H1BP16401 226 aaKnown RBP8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 CTRB1P17538 263 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 CRHBPP24387 322 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 TMBIM6P55061 237 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 CLDN12P56749 244 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 TNFRSF9Q07011 255 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 PLA2G7Q13093 441 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 TBCEQ15813 527 aaPredicted RBP8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 TNXAQ16473 311 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 POU2AF1Q16633 256 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 ANKRD55Q3KP44 614 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 CTRB2Q6GPI1 263 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 OR4A47Q6IF82 309 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 Q6ZWC4 215 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 SLC16A13Q7RTY0 426 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 CCDC140Q96MF4 163 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 FYTTD1Q96QD9 318 aaKnown RBP8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 RBMX2Q9Y388 322 aaKnown RBP8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 PRELID3BQ9Y3B1 194 aa8.4□□□□□ -1.06
CLSTN3-206ENST00000535668 IGKV1D-8A0A087WSZ0 117 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 A0A1B0GW64 132 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 TRDV1A0A1B0GX56 115 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 SCGNO76038 276 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 ACTL6BO94805 426 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 KBTBD11O94819 623 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 DHFRP00374 187 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 GNB3P16520 340 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 CD36P16671 472 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 FAM106AQ4KMX7 169 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 HACD4Q5VWC8 232 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 CNIH2Q6PI25 160 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 ZNF66Q6ZN08 573 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 DEFB125Q8N687 156 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 OR4A5Q8NH83 315 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 LINC00476Q8WZB0 136 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 FCGR1BQ92637 280 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 OR2A7Q96R45 310 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 PHB2Q99623 299 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 OVOL2Q9BRP0 275 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 AIFM2Q9BRQ8 373 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 GINS4Q9BRT9 223 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 SRD5A3Q9H8P0 318 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 PLEKHA3Q9HB20 300 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 NDUFB11Q9NX14 153 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 BET1LQ9NYM9 111 aa8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 MRPS7Q9Y2R9 242 aaKnown RBP8.39□□□□□ -1.07
CLSTN3-206ENST00000535668 IGLV11-55A0A075B6I3 123 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 TRBV7-1A0A0A6YYK4 115 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 KIR2DL5BA0A0G2JN68 375 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 KIR2DL5BA0A0G2JPC4 375 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 E7EUB6 86 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 FGF9P31371 208 aaPredicted RBP8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 SCAND1P57086 179 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 RPL30P62888 115 aaKnown RBP8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 IDO2Q6ZQW0 420 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 CROCCP3Q8IVE0 287 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 TMEM61Q8N0U2 210 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 KIR2DL5AQ8N109 375 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 ZBTB34Q8NCN2 500 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 OR4S2Q8NH73 311 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 KIR2DL5BQ8NHK3 375 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 RAB2BQ8WUD1 216 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 CXorf58Q96LI9 332 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 C5orf66Q9H5L9 145 aa8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 MRPL27Q9P0M9 148 aaKnown RBP8.38□□□□□ -1.07
CLSTN3-206ENST00000535668 UBE2CO00762 179 aa8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 MPPED1O15442 326 aa8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 NDUFB8O95169 186 aa8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 OR2C1O95371 312 aa8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 PTBP1P26599 531 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 DEFA5Q01523 94 aa8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 ZNF57Q68EA5 555 aaPredicted RBP8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 KCTD9Q7L273 389 aa8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 NR2C2APQ86WQ0 139 aa8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 ACOT12Q8WYK0 555 aa8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 GGTLC1Q9BX51 225 aa8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 ZNF436Q9C0F3 470 aaPredicted RBP8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 RETNQ9HD89 108 aa8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 FBXL7Q9UJT9 491 aa8.37□□□□□ -1.07
CLSTN3-206ENST00000535668 CCDC160A6NGH7 325 aa8.36□□□□□ -1.07
CLSTN3-206ENST00000535668 CGB1A6NKQ9 187 aa8.36□□□□□ -1.07
CLSTN3-206ENST00000535668 PPP5D1E7EU14 171 aa8.36□□□□□ -1.07
CLSTN3-206ENST00000535668 FCGR3BO75015 233 aa8.36□□□□□ -1.07
CLSTN3-206ENST00000535668 TMEM127O75204 238 aa8.36□□□□□ -1.07
CLSTN3-206ENST00000535668 OR2J3O76001 311 aa8.36□□□□□ -1.07
CLSTN3-206ENST00000535668 HRASP01112 189 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms