RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 RIMS4Q9H426 269 aaPredicted RBP11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 GCM1Q9NP62 436 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 AKAP6Q13023 2319 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 TMEM30CPA0ZSE6 113 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 SS18L1O75177 396 aaPredicted RBP11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 HOXA6P31267 233 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 TIMP3P35625 211 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 PDLIM3Q53GG5 364 aaPredicted RBP11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 ACTL10Q5JWF8 245 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 DPPA3Q6W0C5 159 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 ERASQ7Z444 233 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 ZCCHC24Q8N2G6 241 aaKnown RBP11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 Q8N7P7 452 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 LRRC29Q8WV35 223 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 TMEM170AQ8WVE7 144 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 DCAF16Q9NXF7 216 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 KMT2EQ8IZD2 1858 aa11.54□□□□□ -0.56
LPCAT3-203ENST00000535479 F6UZH7 168 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 CGAP01215 116 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 SP1P08047 785 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 ZNF25P17030 456 aaPredicted RBP11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 GPR12P47775 334 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 LGALS4P56470 323 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 SOX8P57073 446 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 MSMPQ1L6U9 139 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 OR4P4Q8NGL7 312 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 RND1Q92730 232 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 LINC00479Q96M42 142 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 CDX2Q99626 313 aaPredicted RBP11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 MGST2Q99735 147 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 K7EN84 100 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 TNFSF15O95150 251 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 ERVK11-1P61568 191 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 ZNF90Q03938 601 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 P2RX4Q99571 388 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 GP6Q9HCN6 339 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 ABCA4P78363 2273 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 LNP1A1A4G5 178 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 SERF1AO75920 110 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 MSMO1Q15800 293 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 KRTCAP3Q53RY4 240 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 TREML4Q6UXN2 200 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 HSPB9Q9BQS6 159 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 SSBP3Q9BWW4 388 aaPredicted RBP11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 PXMP4Q9Y6I8 212 aa11.53□□□□□ -0.56
LPCAT3-203ENST00000535479 TRGV5A0A0B4J1U4 118 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 SPRY3O43610 288 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 KITLGP21583 273 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 CD24P25063 80 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 DLX1P56177 255 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 MRPL54Q6P161 138 aaKnown RBP11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 WDR82Q6UXN9 313 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 FAM19A2Q8N3H0 131 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 OR4A16Q8NH70 328 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 TMEM18Q96B42 140 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 LINC00470Q9BZP3 86 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 OPN3Q9H1Y3 402 aaPredicted RBP11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 BSNQ9UPA5 3926 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 ZFHX3Q15911 3703 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 NKX2-8O15522 239 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 CER1O95813 267 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 PLAUP00749 431 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 WT1P19544 449 aaPredicted RBP11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 PMCHP20382 165 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 DUSP3P51452 185 aaPredicted RBP11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 KRTDAPP60985 99 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 ZNF124Q15973 351 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 Q6ZWC4 215 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 GBGT1Q8N5D6 347 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 SNIP1Q8TAD8 396 aaKnown RBP11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 LRFN3Q9BTN0 628 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 STRADBQ9C0K7 418 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 CTDSP1Q9GZU7 261 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 MBNL3Q9NUK0 354 aaKnown RBP11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 TP53TG3Q9ULZ0 132 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 POLDIP2Q9Y2S7 368 aa11.52□□□□□ -0.57
LPCAT3-203ENST00000535479 APC2O95996 2303 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 MDFIC2A0A1B0GVS7 189 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 WNT2P09544 360 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 IGFBP2P18065 325 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 REG1BP48304 166 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 RPL31P62899 125 aaKnown RBP11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 MIR17HGQ75NE6 70 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 OR8I2Q8N0Y5 310 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 SFRP2Q96HF1 295 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 NDUFAF3Q9BU61 184 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 SERTAD4Q9NUC0 356 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 DSCAMO60469 2012 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 H3BTX0 84 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 MAJINQ3KP22 176 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 RPRMLQ8N4K4 120 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 TMEM242Q9NWH2 141 aa11.51□□□□□ -0.57
LPCAT3-203ENST00000535479 MGST1P10620 155 aaKnown RBP11.5□□□□□ -0.57
LPCAT3-203ENST00000535479 SSTP61278 116 aa11.5□□□□□ -0.57
LPCAT3-203ENST00000535479 CATR1Q13166 79 aa11.5□□□□□ -0.57
LPCAT3-203ENST00000535479 ACP7Q6ZNF0 438 aa11.5□□□□□ -0.57
LPCAT3-203ENST00000535479 BAGE3Q86Y29 109 aa11.5□□□□□ -0.57
LPCAT3-203ENST00000535479 BAGE2Q86Y30 109 aa11.5□□□□□ -0.57
LPCAT3-203ENST00000535479 HSD17B10Q99714 261 aaKnown RBP11.5□□□□□ -0.57
LPCAT3-203ENST00000535479 PKIBQ9C010 78 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 239.7 ms