RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 ZNF182P17025 639 aaPredicted RBP3.87□□□□□ -1.79
USH1C-210ENST00000534556 SLC6A1P30531 599 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 PRSS3P35030 304 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 MFAP2P55001 183 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 ARPC4P59998 168 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 DGCR2P98153 550 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 POU2AF1Q16633 256 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 RTL8BQ17RB0 113 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 IZUMO4Q1ZYL8 232 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 KLK9Q2XQG4 91 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 OR4A47Q6IF82 309 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 ZNF343Q6P1L6 599 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 TMEM65Q6PI78 240 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 ZNF66Q6ZN08 573 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 LHFPL1Q86WI0 220 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 CLVS1Q8IUQ0 354 aaPredicted RBP3.87□□□□□ -1.79
USH1C-210ENST00000534556 SPAG16Q8N0X2 631 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 OR10W1Q8NGF6 305 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 OR5M8Q8NGP6 311 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 OR51H1Q8NH63 302 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 FCAMRQ8WWV6 532 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 ACOT12Q8WYK0 555 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 ADTRPQ96IZ2 230 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 HSD17B10Q99714 261 aaKnown RBP3.87□□□□□ -1.79
USH1C-210ENST00000534556 SOSTQ9BQB4 213 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 GON7Q9BXV9 100 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 SLIRPQ9GZT3 109 aaKnown RBP3.87□□□□□ -1.79
USH1C-210ENST00000534556 RBM38Q9H0Z9 239 aaKnown RBP3.87□□□□□ -1.79
USH1C-210ENST00000534556 VCX3AQ9NNX9 186 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 AKIP1Q9NQ31 210 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 KLK9Q9UKQ9 250 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 SELENOKQ9Y6D0 94 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 CEPT1Q9Y6K0 416 aa3.87□□□□□ -1.79
USH1C-210ENST00000534556 A0A0G2JRQ6 117 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 IGLC7A0M8Q6 106 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 PPP5D1E7EU14 171 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 LINC01619G3V211 115 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 H3BMQ9 156 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 BMPR1BO00238 502 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 UPK2O00526 184 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 OVOL1O14753 267 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 OR2J3O76001 311 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 SLC22A5O76082 557 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 OR2A4O95047 310 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 IGHV3-23P01764 117 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 HLA-AP01891 365 aaKnown RBP3.86□□□□□ -1.79
USH1C-210ENST00000534556 CD3DP04234 171 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 HSPB1P04792 205 aaKnown RBP3.86□□□□□ -1.79
USH1C-210ENST00000534556 SPNP16150 400 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 CTRB1P17538 263 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 PI3P19957 117 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 CBX5P45973 191 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 RPL27AP46776 148 aaKnown RBP3.86□□□□□ -1.79
USH1C-210ENST00000534556 RORCP51449 518 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 MECP2P51608 486 aaKnown RBP3.86□□□□□ -1.79
USH1C-210ENST00000534556 OR2B8PP59922 312 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 RHOGP84095 191 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 WT1-ASQ06250 92 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 TMEM267Q0VDI3 215 aaPredicted RBP3.86□□□□□ -1.79
USH1C-210ENST00000534556 KLF5Q13887 457 aaPredicted RBP3.86□□□□□ -1.79
USH1C-210ENST00000534556 MSMO1Q15800 293 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 VMA21Q3ZAQ7 101 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 PHLDA2Q53GA4 152 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 C9orf66Q5T8R8 295 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 CTRB2Q6GPI1 263 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 FAAP20Q6NZ36 180 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 ACSM6Q6P461 480 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 REC114Q7Z4M0 266 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 GPR141Q7Z602 305 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 MMD2Q8IY49 270 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 Q8N1Y9 231 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 TTC9CQ8N5M4 171 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 TCTEX1D1Q8N7M0 179 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 OR5H2Q8NGV7 314 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 OR4S2Q8NH73 311 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 CCDC140Q96MF4 163 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 CMTM3Q96MX0 182 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 OR2A7Q96R45 310 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 DCUN1D5Q9BTE7 237 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 RSRP1Q9BUV0 290 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 NXF2Q9GZY0 626 aaKnown RBP3.86□□□□□ -1.79
USH1C-210ENST00000534556 IFT46Q9NQC8 304 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 COA4Q9NYJ1 87 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 BET1LQ9NYM9 111 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 EXTL2Q9UBQ6 330 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 MTFP1Q9UDX5 166 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 NSG2Q9Y328 171 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 PRELID3BQ9Y3B1 194 aa3.86□□□□□ -1.79
USH1C-210ENST00000534556 EPPK1P58107 5090 aaKnown RBP3.86□□□□□ -1.79
USH1C-210ENST00000534556 DNAH1Q9P2D7 4330 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 IGLV11-55A0A075B6I3 123 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 TEX50A0A1B0GTY4 177 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 MFSD2BA6NFX1 497 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 FAM25AB3EWG3 89 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 FAM25CB3EWG5 89 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 FAM25GB3EWG6 89 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 F8W735 103 aaPredicted RBP3.85□□□□□ -1.79
USH1C-210ENST00000534556 H3BUA1 57 aa3.85□□□□□ -1.79
USH1C-210ENST00000534556 RBFOX2O43251 390 aaKnown RBP eCLIP3.85□□□□□ -1.79
USH1C-210ENST00000534556 DUS4LO95620 317 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms