RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 CFHR3Q02985 330 aa19■□□□□ 0.63
SIPA1-210ENST00000534406 TNXAQ16473 311 aa19■□□□□ 0.63
SIPA1-210ENST00000534406 OR4A5Q8NH83 315 aa19■□□□□ 0.63
SIPA1-210ENST00000534406 SGMS2Q8NHU3 365 aa19■□□□□ 0.63
SIPA1-210ENST00000534406 RTBDNQ9BSG5 229 aaPredicted RBP19■□□□□ 0.63
SIPA1-210ENST00000534406 FAM103A1Q9BTL3 118 aaKnown RBP19■□□□□ 0.63
SIPA1-210ENST00000534406 WDR12Q9GZL7 423 aaKnown RBP19■□□□□ 0.63
SIPA1-210ENST00000534406 BET1LQ9NYM9 111 aa19■□□□□ 0.63
SIPA1-210ENST00000534406 NAP1L6A6NFF2 107 aa18.99■□□□□ 0.63
SIPA1-210ENST00000534406 MARCH11A6NNE9 402 aa18.99■□□□□ 0.63
SIPA1-210ENST00000534406 G3V318 75 aa18.99■□□□□ 0.63
SIPA1-210ENST00000534406 SERPINE2P07093 398 aa18.99■□□□□ 0.63
SIPA1-210ENST00000534406 OR4A47Q6IF82 309 aa18.99■□□□□ 0.63
SIPA1-210ENST00000534406 CITED2Q99967 270 aaPredicted RBP18.99■□□□□ 0.63
SIPA1-210ENST00000534406 TMEM140Q9NV12 185 aa18.99■□□□□ 0.63
SIPA1-210ENST00000534406 VSIG4Q9Y279 399 aa18.99■□□□□ 0.63
SIPA1-210ENST00000534406 C3orf85A0A1B0GTC6 90 aa18.98■□□□□ 0.63
SIPA1-210ENST00000534406 LINC00854A0A1B0GVQ3 168 aa18.98■□□□□ 0.63
SIPA1-210ENST00000534406 B3GALNT1O75752 331 aa18.98■□□□□ 0.63
SIPA1-210ENST00000534406 OPN1MWP04001 364 aa18.98■□□□□ 0.63
SIPA1-210ENST00000534406 OPN1MW2P0DN77 364 aa18.98■□□□□ 0.63
SIPA1-210ENST00000534406 OPN1MW3P0DN78 364 aa18.98■□□□□ 0.63
SIPA1-210ENST00000534406 EGR2P11161 476 aaPredicted RBP18.98■□□□□ 0.63
SIPA1-210ENST00000534406 TMEM267Q0VDI3 215 aaPredicted RBP18.98■□□□□ 0.63
SIPA1-210ENST00000534406 TCTEX1D4Q5JR98 221 aa18.98■□□□□ 0.63
SIPA1-210ENST00000534406 KHDC1LQ5JSQ8 128 aa18.98■□□□□ 0.63
SIPA1-210ENST00000534406 HIST2H2BDQ6DRA6 164 aa18.98■□□□□ 0.63
SIPA1-210ENST00000534406 TEX38Q6PEX7 206 aa18.98■□□□□ 0.63
SIPA1-210ENST00000534406 TP53RKQ96S44 253 aa18.98■□□□□ 0.63
SIPA1-210ENST00000534406 C7orf50Q9BRJ6 194 aaKnown RBP18.98■□□□□ 0.63
SIPA1-210ENST00000534406 TEX13DA0A0J9YY54 714 aaPredicted RBP18.97■□□□□ 0.63
SIPA1-210ENST00000534406 CENPXA8MT69 81 aa18.97■□□□□ 0.63
SIPA1-210ENST00000534406 IGHG4P01861 327 aa18.97■□□□□ 0.63
SIPA1-210ENST00000534406 RPA2P15927 270 aa18.97■□□□□ 0.63
SIPA1-210ENST00000534406 CD40LGP29965 261 aa18.97■□□□□ 0.63
SIPA1-210ENST00000534406 CD83Q01151 205 aa18.97■□□□□ 0.63
SIPA1-210ENST00000534406 FOXE3Q13461 319 aa18.97■□□□□ 0.63
SIPA1-210ENST00000534406 ZNF846Q147U1 533 aa18.97■□□□□ 0.63
SIPA1-210ENST00000534406 C19orf54Q5BKX5 351 aa18.97■□□□□ 0.63
SIPA1-210ENST00000534406 UNQ5815/PRO19632Q6UWF5 114 aa18.97■□□□□ 0.63
SIPA1-210ENST00000534406 SRSF12Q8WXF0 261 aaKnown RBP18.97■□□□□ 0.63
SIPA1-210ENST00000534406 SLC25A21Q9BQT8 299 aaPredicted RBP18.97■□□□□ 0.63
SIPA1-210ENST00000534406 NAA60Q9H7X0 242 aa18.97■□□□□ 0.63
SIPA1-210ENST00000534406 FOXA2Q9Y261 457 aaPredicted RBP18.97■□□□□ 0.63
SIPA1-210ENST00000534406 NUBP2Q9Y5Y2 271 aa18.97■□□□□ 0.63
SIPA1-210ENST00000534406 TCRBV4S1A1TA0A5B7 111 aa18.96■□□□□ 0.63
SIPA1-210ENST00000534406 CRYM-AS1A6NIL9 109 aa18.96■□□□□ 0.63
SIPA1-210ENST00000534406 KRASP01116 189 aa18.96■□□□□ 0.63
SIPA1-210ENST00000534406 MAS1LP35410 378 aa18.96■□□□□ 0.63
SIPA1-210ENST00000534406 G6PCP35575 357 aa18.96■□□□□ 0.63
SIPA1-210ENST00000534406 RPL8P62917 257 aaKnown RBP18.96■□□□□ 0.63
SIPA1-210ENST00000534406 RBMS2Q15434 407 aaKnown RBP18.96■□□□□ 0.63
SIPA1-210ENST00000534406 C2orf68Q2NKX9 166 aa18.96■□□□□ 0.63
SIPA1-210ENST00000534406 CXorf66Q5JRM2 361 aaPredicted RBP18.96■□□□□ 0.63
SIPA1-210ENST00000534406 NDUFA11Q86Y39 141 aa18.96■□□□□ 0.63
SIPA1-210ENST00000534406 LFNGQ8NES3 379 aa18.96■□□□□ 0.63
SIPA1-210ENST00000534406 A0A1W2PN81 502 aa18.95■□□□□ 0.62
SIPA1-210ENST00000534406 M0QZ24 198 aa18.95■□□□□ 0.62
SIPA1-210ENST00000534406 ELANEP08246 267 aa18.95■□□□□ 0.62
SIPA1-210ENST00000534406 PPIFP30405 207 aaKnown RBP18.95■□□□□ 0.62
SIPA1-210ENST00000534406 CHRNA7P36544 502 aa18.95■□□□□ 0.62
SIPA1-210ENST00000534406 AKIRIN2Q53H80 203 aa18.95■□□□□ 0.62
SIPA1-210ENST00000534406 C10orf55Q5SWW7 151 aa18.95■□□□□ 0.62
SIPA1-210ENST00000534406 MINDY2Q8NBR6 621 aa18.95■□□□□ 0.62
SIPA1-210ENST00000534406 PHB2Q99623 299 aa18.95■□□□□ 0.62
SIPA1-210ENST00000534406 TSSC4Q9Y5U2 329 aaPredicted RBP18.95■□□□□ 0.62
SIPA1-210ENST00000534406 UPK2O00526 184 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 IGKV1-39P01597 117 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 IGKV1D-39P04432 117 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 HLA-GP17693 338 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 UCP1P25874 307 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 TRIM16LQ309B1 348 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 NSUN5P1Q3KNT7 163 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 SP6Q3SY56 376 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 SGPP2Q8IWX5 399 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 CADM3Q8N126 398 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 ADAD2Q8NCV1 583 aaKnown RBP18.94■□□□□ 0.62
SIPA1-210ENST00000534406 TMEM230Q96A57 120 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 SPIN2AQ99865 258 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 SPIN2BQ9BPZ2 258 aa18.94■□□□□ 0.62
SIPA1-210ENST00000534406 FGF2P09038 288 aa18.93■□□□□ 0.62
SIPA1-210ENST00000534406 OR5AC1P0C628 307 aa18.93■□□□□ 0.62
SIPA1-210ENST00000534406 RPL27AP46776 148 aaKnown RBP18.93■□□□□ 0.62
SIPA1-210ENST00000534406 CCR6P51684 374 aa18.93■□□□□ 0.62
SIPA1-210ENST00000534406 TMED4Q7Z7H5 227 aa18.93■□□□□ 0.62
SIPA1-210ENST00000534406 RNF152Q8N8N0 203 aa18.93■□□□□ 0.62
SIPA1-210ENST00000534406 TMEM68Q96MH6 324 aa18.93■□□□□ 0.62
SIPA1-210ENST00000534406 TMEM222Q9H0R3 208 aa18.93■□□□□ 0.62
SIPA1-210ENST00000534406 TRAV3A0A0B4J244 114 aa18.92■□□□□ 0.62
SIPA1-210ENST00000534406 A0A1W2PRX2 142 aa18.92■□□□□ 0.62
SIPA1-210ENST00000534406 IGLV1-40P01703 118 aa18.92■□□□□ 0.62
SIPA1-210ENST00000534406 IL6RP08887 468 aaPredicted RBP18.92■□□□□ 0.62
SIPA1-210ENST00000534406 AKR1C4P17516 323 aa18.92■□□□□ 0.62
SIPA1-210ENST00000534406 PSMB8P28062 276 aa18.92■□□□□ 0.62
SIPA1-210ENST00000534406 OR5M8Q8NGP6 311 aa18.92■□□□□ 0.62
SIPA1-210ENST00000534406 SEC22AQ96IW7 307 aa18.92■□□□□ 0.62
SIPA1-210ENST00000534406 WNK1Q9H4A3 2382 aa18.92■□□□□ 0.62
SIPA1-210ENST00000534406 MSGN1A6NI15 193 aa18.91■□□□□ 0.62
SIPA1-210ENST00000534406 ADARB2-AS1A8MUL3 147 aa18.91■□□□□ 0.62
SIPA1-210ENST00000534406 LYRM1O43325 122 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms