RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 UBQLN2Q9UHD9 624 aa6.9□□□□□ -1.3
PACS1-214ENST00000533811 AK6Q9Y3D8 172 aaKnown RBP6.9□□□□□ -1.3
PACS1-214ENST00000533811 VPS13DQ5THJ4 4388 aa6.9□□□□□ -1.31
PACS1-214ENST00000533811 SRRM4A7MD48 611 aaKnown RBP6.89□□□□□ -1.31
PACS1-214ENST00000533811 NOTOA8MTQ0 251 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 NAPSAO96009 420 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 SCTP09683 121 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 CBLN1P23435 193 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 HTR2CP28335 458 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 RPS19P39019 145 aaKnown RBP6.89□□□□□ -1.31
PACS1-214ENST00000533811 RPS27AP62979 156 aaKnown RBP6.89□□□□□ -1.31
PACS1-214ENST00000533811 TAGLNQ01995 201 aaKnown RBP6.89□□□□□ -1.31
PACS1-214ENST00000533811 C15orf32Q32M92 178 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 ANKRD55Q3KP44 614 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 VMA21Q3ZAQ7 101 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 SPANXN2Q5MJ10 180 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 C1orf100Q5SVJ3 147 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 BTNL8Q6UX41 500 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 UXS1Q8NBZ7 420 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 OR1L6Q8NGR2 347 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 C6orf62Q9GZU0 229 aaPredicted RBP6.89□□□□□ -1.31
PACS1-214ENST00000533811 PLGRKTQ9HBL7 147 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 GHRLQ9UBU3 117 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 MLXQ9UH92 298 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 AK3Q9UIJ7 227 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 TP53TG1Q9Y2A0 90 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 S4R3C0 116 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 DNAH6Q9C0G6 4158 aa6.89□□□□□ -1.31
PACS1-214ENST00000533811 SLC17A2O00624 439 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 ACTL6BO94805 426 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 UBBP0CG47 229 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 RPL35AP18077 110 aaKnown RBP6.88□□□□□ -1.31
PACS1-214ENST00000533811 ARL3P36405 182 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 PRR20EP86478 221 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 PRR20CP86479 221 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 PRR20DP86480 221 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 PRR20BP86481 221 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 PRR20AP86496 221 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 PRSS8Q16651 343 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 RTL8BQ17RB0 113 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 C10orf55Q5SWW7 151 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 CLEC19AQ6UXS0 136 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 RBPMS2Q6ZRY4 209 aaKnown RBP6.88□□□□□ -1.31
PACS1-214ENST00000533811 Q6ZWC4 215 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 NECAP1Q8NC96 275 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 OR6M1Q8NGM8 313 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 C15orf40Q8WUR7 153 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 PTX4Q96A99 478 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 OR2D2Q9H210 308 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 RNF167Q9H6Y7 350 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 RDH8Q9NYR8 311 aa6.88□□□□□ -1.31
PACS1-214ENST00000533811 TRBV9A0A0B4J1U6 114 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 TMEM213A2RRL7 107 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 IFITM5A6NNB3 132 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 LGALS9O00182 355 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 XRCC3O43542 346 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 CRYZL1O95825 349 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 TALDO1P37837 337 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 NANOS2P60321 138 aaKnown RBP6.87□□□□□ -1.31
PACS1-214ENST00000533811 MXD1Q05195 221 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 RAB11BQ15907 218 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 MRGPRG-AS1Q2M3A8 158 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 FAM106AQ4KMX7 169 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 TMEM177Q53S58 311 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 SFXN4Q6P4A7 337 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 C19orf35Q6ZS72 473 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 SLC38A6Q8IZM9 456 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 STPG3Q8N7X2 389 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 TEX45Q8NA69 505 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.87□□□□□ -1.31
PACS1-214ENST00000533811 GFI1Q99684 422 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 SPIN2AQ99865 258 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 SPIN2BQ9BPZ2 258 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 CCDC32Q9BV29 185 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 RIMS4Q9H426 269 aaPredicted RBP6.87□□□□□ -1.31
PACS1-214ENST00000533811 Q9N2K0 584 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 SDHAF2Q9NX18 166 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 FBXL7Q9UJT9 491 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 MGAT4AQ9UM21 535 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 RBM7Q9Y580 266 aaKnown RBP6.87□□□□□ -1.31
PACS1-214ENST00000533811 ETV7Q9Y603 341 aa6.87□□□□□ -1.31
PACS1-214ENST00000533811 A0A0A6YYD4 124 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 TRBV6-6A0A0A6YYG2 114 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 IGKV1-6A0A0C4DH72 117 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 HMX3A6NHT5 357 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 UBE2CO00762 179 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 BET1O15155 118 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 SOCS1O15524 211 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 BPNT1O95861 308 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 IFNA4P05014 189 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 CD3GP09693 182 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 CLEC2LP0C7M8 214 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 ATF4P18848 351 aaPredicted RBP6.86□□□□□ -1.31
PACS1-214ENST00000533811 PPP5CP53041 499 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 OR10A3P58181 314 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 UBE2KP61086 200 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 UNC119Q13432 240 aa6.86□□□□□ -1.31
PACS1-214ENST00000533811 RBMS2Q15434 407 aaKnown RBP6.86□□□□□ -1.31
PACS1-214ENST00000533811 C2orf76Q3KRA6 126 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms