RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 SPCS2Q15005 226 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 SLC25A24Q6NUK1 477 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 CNIH2Q6PI25 160 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 MOB3BQ86TA1 216 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 DRAM1Q8N682 238 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.08□□□□□ -1.44
CASP4-212ENST00000533730 OR56B4Q8NH76 319 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 DYNC2LI1Q8TCX1 351 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 C16orf95Q9H693 158 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 GPN1Q9HCN4 374 aaPredicted RBP6.08□□□□□ -1.44
CASP4-212ENST00000533730 IFT46Q9NQC8 304 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 RDH8Q9NYR8 311 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 OR1A1Q9P1Q5 309 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 RABL2AQ9UBK7 228 aaPredicted RBP6.08□□□□□ -1.44
CASP4-212ENST00000533730 ZNF230Q9UIE0 474 aaPredicted RBP6.08□□□□□ -1.44
CASP4-212ENST00000533730 ANXA10Q9UJ72 324 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 ZFHX3Q15911 3703 aa6.08□□□□□ -1.44
CASP4-212ENST00000533730 IGKV1-6A0A0C4DH72 117 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 hDV102S1A0JD36 115 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 CLPSL1A2RUU4 121 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 PRSS46E5RG02 174 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 SULT1C2O00338 296 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 RGS5O15539 181 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 SSX5O60225 188 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 HPGDSO60760 199 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 SLC22A5O76082 557 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 PRSS3P35030 304 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 ARPC4P59998 168 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 EBI3Q14213 229 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 HES1Q14469 280 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 HERPUD1Q15011 391 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 FAM53AQ6NSI3 398 aaPredicted RBP6.07□□□□□ -1.44
CASP4-212ENST00000533730 ZNF833PQ6ZTB9 187 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 HOGA1Q86XE5 327 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 TMEM219Q86XT9 240 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 C3orf56Q8N813 242 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 THAP8Q8NA92 274 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 BEST4Q8NFU0 473 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 OR2T10Q8NGZ9 312 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 OR2T6Q8NHC8 308 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 MAFIPQ8WZ33 124 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 RBM14Q96PK6 669 aaKnown RBP6.07□□□□□ -1.44
CASP4-212ENST00000533730 AGMATQ9BSE5 352 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 SLC25A33Q9BSK2 321 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 PRSS22Q9GZN4 317 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 IFI27L2Q9H2X8 130 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 NECAP2Q9NVZ3 263 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 NDUFA13Q9P0J0 144 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 RSL24D1Q9UHA3 163 aaKnown RBP6.07□□□□□ -1.44
CASP4-212ENST00000533730 UBQLN2Q9UHD9 624 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 ELF5Q9UKW6 265 aaPredicted RBP6.07□□□□□ -1.44
CASP4-212ENST00000533730 GAB2Q9UQC2 676 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 MOB4Q9Y3A3 225 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 TMED3Q9Y3Q3 217 aa6.07□□□□□ -1.44
CASP4-212ENST00000533730 RBM7Q9Y580 266 aaKnown RBP6.07□□□□□ -1.44
CASP4-212ENST00000533730 SAA2-SAA4A0A096LPE2 208 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 OR5H14A6NHG9 310 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 FGF16O43320 207 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 CHST1O43916 411 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 MOSP00540 346 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 IGKV1D-33P01593 117 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 IGKV1-33P01594 117 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 SAA2P0DJI9 122 aaPredicted RBP6.06□□□□□ -1.44
CASP4-212ENST00000533730 ELK1P19419 428 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 REG1BP48304 166 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 TAS2R46P59540 309 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 MRPS10P82664 201 aaKnown RBP6.06□□□□□ -1.44
CASP4-212ENST00000533730 DIAPH2-AS1Q14236 149 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 CCBE1Q6UXH8 406 aaPredicted RBP6.06□□□□□ -1.44
CASP4-212ENST00000533730 C5orf24Q7Z6I8 188 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 ODF3L1Q8IXM7 274 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 H1FOOQ8IZA3 346 aaPredicted RBP6.06□□□□□ -1.44
CASP4-212ENST00000533730 Q8N2B8 174 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 OR5AP2Q8NGF4 316 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 LINC01006Q8NI28 216 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 NABP2Q9BQ15 211 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 RBM38Q9H0Z9 239 aaKnown RBP6.06□□□□□ -1.44
CASP4-212ENST00000533730 FAM212BQ9NTI7 297 aaPredicted RBP6.06□□□□□ -1.44
CASP4-212ENST00000533730 WDR83OSQ9Y284 106 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 MRPS7Q9Y2R9 242 aaKnown RBP6.06□□□□□ -1.44
CASP4-212ENST00000533730 OR2W1Q9Y3N9 320 aa6.06□□□□□ -1.44
CASP4-212ENST00000533730 ANK3Q12955 4377 aaKnown RBP6.06□□□□□ -1.44
CASP4-212ENST00000533730 IGKV1D-8A0A087WSZ0 117 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 RBBP9O75884 186 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 HLA-DQB1P01920 261 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 APOA2P02652 100 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 OR8U9P0C7N5 309 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 MDKP21741 143 aaPredicted RBP6.05□□□□□ -1.44
CASP4-212ENST00000533730 CD24P25063 80 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 RCVRNP35243 200 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 OR3A3P47888 321 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 ACTBP60709 375 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 MSMO1Q15800 293 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 GBGT1Q8N5D6 347 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 GVQW1Q8N7I0 195 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 NEXN-AS1Q8NBZ9 246 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 OR8U1Q8NH10 309 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 MCFD2Q8NI22 146 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 GPX8Q8TED1 209 aa6.05□□□□□ -1.44
CASP4-212ENST00000533730 BORCS5Q969J3 196 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms