RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 TBC1D26Q86UD7 250 aa13.4□□□□□ -0.26
FGFR1-239ENST00000533619 VKORC1L1Q8N0U8 176 aa13.4□□□□□ -0.26
FGFR1-239ENST00000533619 OR4C16Q8NGL9 310 aa13.4□□□□□ -0.26
FGFR1-239ENST00000533619 GRPEL2Q8TAA5 225 aa13.4□□□□□ -0.26
FGFR1-239ENST00000533619 FAM110DQ8TAY7 271 aaPredicted RBP13.4□□□□□ -0.26
FGFR1-239ENST00000533619 FAM103A1Q9BTL3 118 aaKnown RBP13.4□□□□□ -0.26
FGFR1-239ENST00000533619 ZNF430Q9H8G1 570 aaPredicted RBP13.4□□□□□ -0.26
FGFR1-239ENST00000533619 SLC2A9Q9NRM0 540 aa13.4□□□□□ -0.26
FGFR1-239ENST00000533619 BET1LQ9NYM9 111 aa13.4□□□□□ -0.26
FGFR1-239ENST00000533619 A0A1W2PN81 502 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 MPPED1O15442 326 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 RPLP1P05386 114 aaKnown RBP13.39□□□□□ -0.27
FGFR1-239ENST00000533619 CHRNA7P36544 502 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 LPAR6P43657 344 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 CDX1P47902 265 aaPredicted RBP13.39□□□□□ -0.27
FGFR1-239ENST00000533619 ERVK-16P61578 105 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 SSBP2P81877 361 aaPredicted RBP13.39□□□□□ -0.27
FGFR1-239ENST00000533619 SURF2Q15527 256 aaPredicted RBP13.39□□□□□ -0.27
FGFR1-239ENST00000533619 MRGPRG-AS1Q2M3A8 158 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 SSX9Q7RTT3 188 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 TOMM5Q8N4H5 51 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 CCDC71LQ8N9Z2 235 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 DMBX1Q8NFW5 382 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 SCGB3A2Q96PL1 93 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 PHB2Q99623 299 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 SPIN2AQ99865 258 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 SPIN2BQ9BPZ2 258 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 COPZ2Q9P299 210 aa13.39□□□□□ -0.27
FGFR1-239ENST00000533619 NUDT19A8MXV4 375 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 CTSDP07339 412 aaPredicted RBP13.38□□□□□ -0.27
FGFR1-239ENST00000533619 RAB9AP51151 201 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 PPP5CP53041 499 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 PIGPP57054 158 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 OR4A47Q6IF82 309 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 FAAP20Q6NZ36 180 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 ZNF695Q8IW36 515 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 CADM3Q8N126 398 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 GDPD1Q8N9F7 314 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 OR51S1Q8NGJ8 323 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 MARCH1Q8TCQ1 289 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 SRSF12Q8WXF0 261 aaKnown RBP13.38□□□□□ -0.27
FGFR1-239ENST00000533619 HRASLSQ9HDD0 168 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 BATF3Q9NR55 127 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 SLC2A8Q9NY64 477 aa13.38□□□□□ -0.27
FGFR1-239ENST00000533619 C14orf166Q9Y224 244 aaKnown RBP13.38□□□□□ -0.27
FGFR1-239ENST00000533619 MSGN1A6NI15 193 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 B3GALNT1O75752 331 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 S1PR2O95136 353 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 FGF2P09038 288 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 RPL8P62917 257 aaKnown RBP13.37□□□□□ -0.27
FGFR1-239ENST00000533619 ZNF45Q02386 682 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 ZNF585BQ52M93 769 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 LINC00299Q6ZSB3 139 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 KLHL30-AS1Q8NEE0 82 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 OR13C8Q8NGS7 320 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 TRIM63Q969Q1 353 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 UBE2E2Q96LR5 201 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 SRRQ9GZT4 340 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 SLA2Q9H6Q3 261 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 MCUBQ9NWR8 336 aa13.37□□□□□ -0.27
FGFR1-239ENST00000533619 MARCH11A6NNE9 402 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 H3BUA1 57 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 SERPINE2P07093 398 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 IL6RP08887 468 aaPredicted RBP13.36□□□□□ -0.27
FGFR1-239ENST00000533619 RPA2P15927 270 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 PI3P19957 117 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 INPP1P49441 399 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 KLF9Q13886 244 aaPredicted RBP13.36□□□□□ -0.27
FGFR1-239ENST00000533619 MYOZ3Q8TDC0 251 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 KLK15Q9H2R5 256 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 TMEM140Q9NV12 185 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 GPR132Q9UNW8 380 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 VSIG4Q9Y279 399 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 PKD1L1Q8TDX9 2849 aa13.36□□□□□ -0.27
FGFR1-239ENST00000533619 TRRAPQ9Y4A5 3859 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 UPK2O00526 184 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 SOX15O60248 233 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 BRI3O95415 125 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 KRASP01116 189 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 PF4P02776 101 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 HLA-GP17693 338 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 RPL27AP46776 148 aaKnown RBP13.35□□□□□ -0.27
FGFR1-239ENST00000533619 LCNL1Q6ZST4 164 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 ZNF491Q8N8L2 437 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 OR5T1Q8NG75 326 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 MRGPRFQ96AM1 343 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 COMMD5Q9GZQ3 224 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 ZNF355PQ9NSJ1 428 aa13.35□□□□□ -0.27
FGFR1-239ENST00000533619 C3orf85A0A1B0GTC6 90 aa13.34□□□□□ -0.27
FGFR1-239ENST00000533619 H0Y980 276 aa13.34□□□□□ -0.27
FGFR1-239ENST00000533619 SNAPC5O75971 98 aa13.34□□□□□ -0.27
FGFR1-239ENST00000533619 ATG12O94817 140 aa13.34□□□□□ -0.27
FGFR1-239ENST00000533619 MYCNOSP40205 109 aa13.34□□□□□ -0.27
FGFR1-239ENST00000533619 TRIQKQ629K1 86 aa13.34□□□□□ -0.27
FGFR1-239ENST00000533619 ZNF57Q68EA5 555 aaPredicted RBP13.34□□□□□ -0.27
FGFR1-239ENST00000533619 C8orf86Q6ZUL3 223 aa13.34□□□□□ -0.27
FGFR1-239ENST00000533619 SLC25A42Q86VD7 318 aa13.34□□□□□ -0.27
FGFR1-239ENST00000533619 C4orf3Q8WVX3 66 aa13.34□□□□□ -0.27
FGFR1-239ENST00000533619 TSC22D3Q99576 134 aa13.34□□□□□ -0.27
FGFR1-239ENST00000533619 RTBDNQ9BSG5 229 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms