RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 TRAV18A0A075B6X5 111 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 A0A0A6YYH2 397 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 IGKV1D-13A0A0B4J2D9 117 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 A6NJ64 397 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 SSX5O60225 188 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 HRASP01112 189 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 PRH1P02810 166 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 CSN3P07498 182 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 SMIM18P0DKX4 95 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 IGKV1-13P0DP09 117 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 MAS1LP35410 378 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 IDNKQ5T6J7 187 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 LINC00299Q6ZSB3 139 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 GTSCR1Q86UQ5 136 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 VKORC1L1Q8N0U8 176 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 Q8N402 240 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 MFSD4AQ8N468 514 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 BEST4Q8NFU0 473 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 DIABLOQ9NR28 239 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 C19orf73Q9NVV2 129 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 ZNF257Q9Y2Q1 563 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 DNAH7Q8WXX0 4024 aa9.46□□□□□ -0.9
CAPRIN1-213ENST00000533562 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 LOC100506127A0A0U1RQW1 187 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 TMEM127O75204 238 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 RBMXL2O75526 392 aaKnown RBP9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 KBTBD11O94819 623 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 DHFRP00374 187 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 FCGR2CP31995 323 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 KIR2DS2P43631 304 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 ZNF45Q02386 682 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 EXOSC2Q13868 293 aaKnown RBP9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 MSMO1Q15800 293 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 C15orf32Q32M92 178 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 HOGA1Q86XE5 327 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 ZBTB34Q8NCN2 500 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 OR2K2Q8NGT1 345 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 TMEM167AQ8TBQ9 72 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 KCTD12Q96CX2 325 aaKnown RBP9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 TM2D3Q9BRN9 247 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 TUBA4BQ9H853 241 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 SLC2A9Q9NRM0 540 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 TAS2R8Q9NYW2 309 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 ADAM30Q9UKF2 790 aa9.45□□□□□ -0.9
CAPRIN1-213ENST00000533562 NPIPB5A8MRT5 1133 aa9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 BMPR1BO00238 502 aa9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 OR2J3O76001 311 aa9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 CLEC2LP0C7M8 214 aa9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 LYL1P12980 280 aa9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 RPL27AP46776 148 aaKnown RBP9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 BCAP31P51572 246 aa9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 EIF4EBP1Q13541 118 aaPredicted RBP9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 C10orf55Q5SWW7 151 aa9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 CASC10Q5T4H9 136 aa9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 PUSL1Q8N0Z8 303 aaKnown RBP9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 OR5H6Q8NGV6 325 aa9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 SECTM1Q8WVN6 248 aa9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 FYTTD1Q96QD9 318 aaKnown RBP9.44□□□□□ -0.9
CAPRIN1-213ENST00000533562 HMX3A6NHT5 357 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 TEX22C9J3V5 150 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 NOL3O60936 208 aaKnown RBP9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 GGCTO75223 188 aaKnown RBP9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 IL6RP08887 468 aaPredicted RBP9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 CBX5P45973 191 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 ALDH3B2P48448 385 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 MECP2P51608 486 aaKnown RBP9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 BRWD1-AS2P59051 145 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 RPL8P62917 257 aaKnown RBP9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 SPCS2Q15005 226 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 NEDD8Q15843 81 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 GVQW1Q8N7I0 195 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 OR13F1Q8NGS4 319 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 OR4A5Q8NH83 315 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 SLC25A38Q96DW6 304 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 RNF167Q9H6Y7 350 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 AUNIPQ9H7T9 357 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 CCL28Q9NRJ3 127 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 FBXL7Q9UJT9 491 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 TENM2Q9NT68 2774 aa9.43□□□□□ -0.9
CAPRIN1-213ENST00000533562 RBFOX2O43251 390 aaKnown RBP eCLIP9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 TNFSF12O43508 249 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 PPYP01298 95 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 CRYGCP07315 174 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 ZNF735P0CB33 412 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 DEFA4P12838 97 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 HIST1H1BP16401 226 aaKnown RBP9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 CATR1Q13166 79 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 TIMM50Q3ZCQ8 353 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 SSX9Q7RTT3 188 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 SPAG16Q8N0X2 631 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 OR5AP2Q8NGF4 316 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 CD300LFQ8TDQ1 290 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 GIMAP1Q8WWP7 306 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 S100A16Q96FQ6 103 aaKnown RBP9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 GPHA2Q96T91 129 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 SPATA25Q9BR10 227 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 THAP7Q9BT49 309 aaPredicted RBP9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 SLC5A7Q9GZV3 580 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 HRASLSQ9HDD0 168 aa9.42□□□□□ -0.9
CAPRIN1-213ENST00000533562 BET1LQ9NYM9 111 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms